Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26939 | 81040;81041;81042 | chr2:178565317;178565316;178565315 | chr2:179430044;179430043;179430042 |
N2AB | 25298 | 76117;76118;76119 | chr2:178565317;178565316;178565315 | chr2:179430044;179430043;179430042 |
N2A | 24371 | 73336;73337;73338 | chr2:178565317;178565316;178565315 | chr2:179430044;179430043;179430042 |
N2B | 17874 | 53845;53846;53847 | chr2:178565317;178565316;178565315 | chr2:179430044;179430043;179430042 |
Novex-1 | 17999 | 54220;54221;54222 | chr2:178565317;178565316;178565315 | chr2:179430044;179430043;179430042 |
Novex-2 | 18066 | 54421;54422;54423 | chr2:178565317;178565316;178565315 | chr2:179430044;179430043;179430042 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs1705331466 | None | 0.975 | D | 0.853 | 0.827 | 0.921599369569 | gnomAD-4.0.0 | 1.36853E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.03931E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1705331466 | None | 0.645 | D | 0.763 | 0.825 | 0.839350010842 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs1705331466 | None | 0.645 | D | 0.763 | 0.825 | 0.839350010842 | gnomAD-4.0.0 | 3.71873E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08619E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9603 | likely_pathogenic | 0.9409 | pathogenic | -3.069 | Highly Destabilizing | 0.547 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/C | 0.9134 | likely_pathogenic | 0.8835 | pathogenic | -2.674 | Highly Destabilizing | 0.985 | D | 0.76 | deleterious | None | None | None | None | N |
I/D | 0.9977 | likely_pathogenic | 0.9968 | pathogenic | -3.57 | Highly Destabilizing | 0.981 | D | 0.854 | deleterious | None | None | None | None | N |
I/E | 0.9927 | likely_pathogenic | 0.9898 | pathogenic | -3.345 | Highly Destabilizing | 0.945 | D | 0.859 | deleterious | None | None | None | None | N |
I/F | 0.3561 | ambiguous | 0.3246 | benign | -1.898 | Destabilizing | 0.864 | D | 0.74 | deleterious | D | 0.583865081 | None | None | N |
I/G | 0.9902 | likely_pathogenic | 0.9855 | pathogenic | -3.612 | Highly Destabilizing | 0.945 | D | 0.863 | deleterious | None | None | None | None | N |
I/H | 0.9743 | likely_pathogenic | 0.9647 | pathogenic | -2.939 | Highly Destabilizing | 0.995 | D | 0.83 | deleterious | None | None | None | None | N |
I/K | 0.9689 | likely_pathogenic | 0.9591 | pathogenic | -2.588 | Highly Destabilizing | 0.945 | D | 0.857 | deleterious | None | None | None | None | N |
I/L | 0.1951 | likely_benign | 0.1802 | benign | -1.485 | Destabilizing | 0.141 | N | 0.462 | neutral | D | 0.562264845 | None | None | N |
I/M | 0.2246 | likely_benign | 0.2004 | benign | -1.596 | Destabilizing | 0.864 | D | 0.699 | prob.neutral | D | 0.608999584 | None | None | N |
I/N | 0.9643 | likely_pathogenic | 0.9553 | pathogenic | -2.993 | Highly Destabilizing | 0.975 | D | 0.853 | deleterious | D | 0.661488438 | None | None | N |
I/P | 0.9966 | likely_pathogenic | 0.9952 | pathogenic | -1.997 | Destabilizing | 0.981 | D | 0.846 | deleterious | None | None | None | None | N |
I/Q | 0.9715 | likely_pathogenic | 0.9623 | pathogenic | -2.867 | Highly Destabilizing | 0.981 | D | 0.853 | deleterious | None | None | None | None | N |
I/R | 0.9494 | likely_pathogenic | 0.9372 | pathogenic | -2.16 | Highly Destabilizing | 0.945 | D | 0.856 | deleterious | None | None | None | None | N |
I/S | 0.9604 | likely_pathogenic | 0.9453 | pathogenic | -3.686 | Highly Destabilizing | 0.864 | D | 0.839 | deleterious | D | 0.635950326 | None | None | N |
I/T | 0.9541 | likely_pathogenic | 0.931 | pathogenic | -3.315 | Highly Destabilizing | 0.645 | D | 0.763 | deleterious | D | 0.661084829 | None | None | N |
I/V | 0.1605 | likely_benign | 0.1241 | benign | -1.997 | Destabilizing | 0.002 | N | 0.279 | neutral | D | 0.56197196 | None | None | N |
I/W | 0.9379 | likely_pathogenic | 0.9248 | pathogenic | -2.255 | Highly Destabilizing | 0.995 | D | 0.821 | deleterious | None | None | None | None | N |
I/Y | 0.8907 | likely_pathogenic | 0.8593 | pathogenic | -2.063 | Highly Destabilizing | 0.945 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.