Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26940 | 81043;81044;81045 | chr2:178565314;178565313;178565312 | chr2:179430041;179430040;179430039 |
N2AB | 25299 | 76120;76121;76122 | chr2:178565314;178565313;178565312 | chr2:179430041;179430040;179430039 |
N2A | 24372 | 73339;73340;73341 | chr2:178565314;178565313;178565312 | chr2:179430041;179430040;179430039 |
N2B | 17875 | 53848;53849;53850 | chr2:178565314;178565313;178565312 | chr2:179430041;179430040;179430039 |
Novex-1 | 18000 | 54223;54224;54225 | chr2:178565314;178565313;178565312 | chr2:179430041;179430040;179430039 |
Novex-2 | 18067 | 54424;54425;54426 | chr2:178565314;178565313;178565312 | chr2:179430041;179430040;179430039 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs373713790 | 0.743 | 0.032 | N | 0.496 | 0.333 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/I | rs373713790 | 0.743 | 0.032 | N | 0.496 | 0.333 | None | gnomAD-4.0.0 | 2.47908E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39074E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7829 | likely_pathogenic | 0.7272 | pathogenic | -0.324 | Destabilizing | 0.86 | D | 0.563 | neutral | None | None | None | None | N |
K/C | 0.8958 | likely_pathogenic | 0.867 | pathogenic | -0.476 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
K/D | 0.9522 | likely_pathogenic | 0.9263 | pathogenic | -0.291 | Destabilizing | 0.993 | D | 0.627 | neutral | None | None | None | None | N |
K/E | 0.6484 | likely_pathogenic | 0.5664 | pathogenic | -0.225 | Destabilizing | 0.966 | D | 0.575 | neutral | D | 0.522245118 | None | None | N |
K/F | 0.9563 | likely_pathogenic | 0.9339 | pathogenic | -0.229 | Destabilizing | 0.956 | D | 0.641 | neutral | None | None | None | None | N |
K/G | 0.8298 | likely_pathogenic | 0.7812 | pathogenic | -0.647 | Destabilizing | 0.978 | D | 0.535 | neutral | None | None | None | None | N |
K/H | 0.573 | likely_pathogenic | 0.5137 | ambiguous | -1.07 | Destabilizing | 0.998 | D | 0.582 | neutral | None | None | None | None | N |
K/I | 0.7785 | likely_pathogenic | 0.6952 | pathogenic | 0.488 | Stabilizing | 0.032 | N | 0.496 | neutral | N | 0.490051331 | None | None | N |
K/L | 0.7197 | likely_pathogenic | 0.6649 | pathogenic | 0.488 | Stabilizing | 0.514 | D | 0.504 | neutral | None | None | None | None | N |
K/M | 0.5905 | likely_pathogenic | 0.5204 | ambiguous | 0.454 | Stabilizing | 0.988 | D | 0.579 | neutral | None | None | None | None | N |
K/N | 0.8607 | likely_pathogenic | 0.817 | pathogenic | -0.303 | Destabilizing | 0.99 | D | 0.626 | neutral | N | 0.483757453 | None | None | N |
K/P | 0.956 | likely_pathogenic | 0.9313 | pathogenic | 0.249 | Stabilizing | 0.993 | D | 0.609 | neutral | None | None | None | None | N |
K/Q | 0.3364 | likely_benign | 0.2933 | benign | -0.495 | Destabilizing | 0.99 | D | 0.63 | neutral | N | 0.486502477 | None | None | N |
K/R | 0.0931 | likely_benign | 0.0885 | benign | -0.46 | Destabilizing | 0.966 | D | 0.528 | neutral | N | 0.491346208 | None | None | N |
K/S | 0.8201 | likely_pathogenic | 0.7819 | pathogenic | -0.889 | Destabilizing | 0.926 | D | 0.57 | neutral | None | None | None | None | N |
K/T | 0.511 | ambiguous | 0.4682 | ambiguous | -0.638 | Destabilizing | 0.942 | D | 0.573 | neutral | N | 0.49977369 | None | None | N |
K/V | 0.7306 | likely_pathogenic | 0.6634 | pathogenic | 0.249 | Stabilizing | 0.514 | D | 0.512 | neutral | None | None | None | None | N |
K/W | 0.9187 | likely_pathogenic | 0.885 | pathogenic | -0.127 | Destabilizing | 0.998 | D | 0.648 | neutral | None | None | None | None | N |
K/Y | 0.9039 | likely_pathogenic | 0.8651 | pathogenic | 0.206 | Stabilizing | 0.978 | D | 0.601 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.