Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26951 | 81076;81077;81078 | chr2:178565281;178565280;178565279 | chr2:179430008;179430007;179430006 |
N2AB | 25310 | 76153;76154;76155 | chr2:178565281;178565280;178565279 | chr2:179430008;179430007;179430006 |
N2A | 24383 | 73372;73373;73374 | chr2:178565281;178565280;178565279 | chr2:179430008;179430007;179430006 |
N2B | 17886 | 53881;53882;53883 | chr2:178565281;178565280;178565279 | chr2:179430008;179430007;179430006 |
Novex-1 | 18011 | 54256;54257;54258 | chr2:178565281;178565280;178565279 | chr2:179430008;179430007;179430006 |
Novex-2 | 18078 | 54457;54458;54459 | chr2:178565281;178565280;178565279 | chr2:179430008;179430007;179430006 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.055 | N | 0.601 | 0.07 | 0.198526703765 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | None | None | 0.029 | N | 0.464 | 0.147 | 0.209622950755 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0737 | likely_benign | 0.0721 | benign | -1.187 | Destabilizing | None | N | 0.147 | neutral | N | 0.457697258 | None | None | N |
T/C | 0.2778 | likely_benign | 0.2474 | benign | -0.887 | Destabilizing | 0.676 | D | 0.568 | neutral | None | None | None | None | N |
T/D | 0.4198 | ambiguous | 0.3949 | ambiguous | -1.309 | Destabilizing | 0.016 | N | 0.508 | neutral | None | None | None | None | N |
T/E | 0.2621 | likely_benign | 0.2554 | benign | -1.136 | Destabilizing | None | N | 0.297 | neutral | None | None | None | None | N |
T/F | 0.2011 | likely_benign | 0.1806 | benign | -0.959 | Destabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | N |
T/G | 0.2435 | likely_benign | 0.2173 | benign | -1.579 | Destabilizing | 0.016 | N | 0.513 | neutral | None | None | None | None | N |
T/H | 0.2263 | likely_benign | 0.2139 | benign | -1.737 | Destabilizing | 0.356 | N | 0.589 | neutral | None | None | None | None | N |
T/I | 0.1128 | likely_benign | 0.1039 | benign | -0.17 | Destabilizing | 0.055 | N | 0.601 | neutral | N | 0.457684031 | None | None | N |
T/K | 0.1876 | likely_benign | 0.1896 | benign | -0.537 | Destabilizing | None | N | 0.299 | neutral | None | None | None | None | N |
T/L | 0.089 | likely_benign | 0.0874 | benign | -0.17 | Destabilizing | 0.031 | N | 0.511 | neutral | None | None | None | None | N |
T/M | 0.0792 | likely_benign | 0.0775 | benign | -0.138 | Destabilizing | 0.356 | N | 0.581 | neutral | None | None | None | None | N |
T/N | 0.1434 | likely_benign | 0.1332 | benign | -1.126 | Destabilizing | 0.029 | N | 0.464 | neutral | N | 0.498211409 | None | None | N |
T/P | 0.667 | likely_pathogenic | 0.6754 | pathogenic | -0.478 | Destabilizing | 0.055 | N | 0.575 | neutral | N | 0.505048264 | None | None | N |
T/Q | 0.2003 | likely_benign | 0.1926 | benign | -0.986 | Destabilizing | 0.001 | N | 0.4 | neutral | None | None | None | None | N |
T/R | 0.1363 | likely_benign | 0.141 | benign | -0.686 | Destabilizing | 0.038 | N | 0.547 | neutral | None | None | None | None | N |
T/S | 0.1007 | likely_benign | 0.0911 | benign | -1.373 | Destabilizing | None | N | 0.195 | neutral | N | 0.4893424 | None | None | N |
T/V | 0.0962 | likely_benign | 0.0921 | benign | -0.478 | Destabilizing | 0.016 | N | 0.432 | neutral | None | None | None | None | N |
T/W | 0.5406 | ambiguous | 0.5 | ambiguous | -1.047 | Destabilizing | 0.864 | D | 0.609 | neutral | None | None | None | None | N |
T/Y | 0.2489 | likely_benign | 0.2258 | benign | -0.682 | Destabilizing | 0.356 | N | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.