Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26966 | 81121;81122;81123 | chr2:178565236;178565235;178565234 | chr2:179429963;179429962;179429961 |
N2AB | 25325 | 76198;76199;76200 | chr2:178565236;178565235;178565234 | chr2:179429963;179429962;179429961 |
N2A | 24398 | 73417;73418;73419 | chr2:178565236;178565235;178565234 | chr2:179429963;179429962;179429961 |
N2B | 17901 | 53926;53927;53928 | chr2:178565236;178565235;178565234 | chr2:179429963;179429962;179429961 |
Novex-1 | 18026 | 54301;54302;54303 | chr2:178565236;178565235;178565234 | chr2:179429963;179429962;179429961 |
Novex-2 | 18093 | 54502;54503;54504 | chr2:178565236;178565235;178565234 | chr2:179429963;179429962;179429961 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1705281282 | None | 0.491 | N | 0.494 | 0.272 | 0.260249123532 | gnomAD-4.0.0 | 3.85873E-05 | None | None | None | None | N | None | 6.36699E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.08754E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0872 | likely_benign | 0.0799 | benign | -0.764 | Destabilizing | 0.007 | N | 0.167 | neutral | None | None | None | None | N |
S/C | 0.1094 | likely_benign | 0.0995 | benign | -0.431 | Destabilizing | 0.987 | D | 0.466 | neutral | N | 0.503257741 | None | None | N |
S/D | 0.3743 | ambiguous | 0.3301 | benign | 0.154 | Stabilizing | 0.39 | N | 0.361 | neutral | None | None | None | None | N |
S/E | 0.4854 | ambiguous | 0.445 | ambiguous | 0.205 | Stabilizing | 0.561 | D | 0.363 | neutral | None | None | None | None | N |
S/F | 0.184 | likely_benign | 0.1575 | benign | -0.79 | Destabilizing | 0.901 | D | 0.533 | neutral | None | None | None | None | N |
S/G | 0.1046 | likely_benign | 0.0978 | benign | -1.059 | Destabilizing | 0.166 | N | 0.355 | neutral | N | 0.490887478 | None | None | N |
S/H | 0.2845 | likely_benign | 0.2553 | benign | -1.367 | Destabilizing | 0.009 | N | 0.333 | neutral | None | None | None | None | N |
S/I | 0.1475 | likely_benign | 0.1316 | benign | -0.072 | Destabilizing | 0.013 | N | 0.401 | neutral | N | 0.504027503 | None | None | N |
S/K | 0.6456 | likely_pathogenic | 0.5912 | pathogenic | -0.295 | Destabilizing | 0.561 | D | 0.354 | neutral | None | None | None | None | N |
S/L | 0.0955 | likely_benign | 0.0849 | benign | -0.072 | Destabilizing | 0.209 | N | 0.479 | neutral | None | None | None | None | N |
S/M | 0.1573 | likely_benign | 0.1455 | benign | 0.007 | Stabilizing | 0.901 | D | 0.485 | neutral | None | None | None | None | N |
S/N | 0.1049 | likely_benign | 0.0949 | benign | -0.382 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.417869956 | None | None | N |
S/P | 0.6727 | likely_pathogenic | 0.695 | pathogenic | -0.268 | Destabilizing | 0.722 | D | 0.495 | neutral | None | None | None | None | N |
S/Q | 0.4527 | ambiguous | 0.4119 | ambiguous | -0.423 | Destabilizing | 0.818 | D | 0.419 | neutral | None | None | None | None | N |
S/R | 0.5562 | ambiguous | 0.5081 | ambiguous | -0.351 | Destabilizing | 0.491 | N | 0.494 | neutral | N | 0.46589319 | None | None | N |
S/T | 0.0683 | likely_benign | 0.0648 | benign | -0.424 | Destabilizing | 0.005 | N | 0.163 | neutral | N | 0.394107662 | None | None | N |
S/V | 0.1585 | likely_benign | 0.1437 | benign | -0.268 | Destabilizing | 0.209 | N | 0.476 | neutral | None | None | None | None | N |
S/W | 0.3353 | likely_benign | 0.3079 | benign | -0.76 | Destabilizing | 0.991 | D | 0.566 | neutral | None | None | None | None | N |
S/Y | 0.1747 | likely_benign | 0.1558 | benign | -0.457 | Destabilizing | 0.692 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.