Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26999 | 81220;81221;81222 | chr2:178565137;178565136;178565135 | chr2:179429864;179429863;179429862 |
N2AB | 25358 | 76297;76298;76299 | chr2:178565137;178565136;178565135 | chr2:179429864;179429863;179429862 |
N2A | 24431 | 73516;73517;73518 | chr2:178565137;178565136;178565135 | chr2:179429864;179429863;179429862 |
N2B | 17934 | 54025;54026;54027 | chr2:178565137;178565136;178565135 | chr2:179429864;179429863;179429862 |
Novex-1 | 18059 | 54400;54401;54402 | chr2:178565137;178565136;178565135 | chr2:179429864;179429863;179429862 |
Novex-2 | 18126 | 54601;54602;54603 | chr2:178565137;178565136;178565135 | chr2:179429864;179429863;179429862 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1252117916 | None | 0.999 | N | 0.656 | 0.543 | 0.602722737475 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/C | rs1252117916 | None | 0.999 | N | 0.656 | 0.543 | 0.602722737475 | gnomAD-4.0.0 | 4.33876E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93414E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6974 | likely_pathogenic | 0.6997 | pathogenic | -0.809 | Destabilizing | 0.916 | D | 0.497 | neutral | None | None | None | None | I |
Y/C | 0.3036 | likely_benign | 0.2789 | benign | -0.007 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.507369349 | None | None | I |
Y/D | 0.3734 | ambiguous | 0.4124 | ambiguous | 1.041 | Stabilizing | 0.025 | N | 0.489 | neutral | N | 0.427717938 | None | None | I |
Y/E | 0.7873 | likely_pathogenic | 0.798 | pathogenic | 1.028 | Stabilizing | 0.845 | D | 0.495 | neutral | None | None | None | None | I |
Y/F | 0.1155 | likely_benign | 0.1102 | benign | -0.376 | Destabilizing | 0.981 | D | 0.544 | neutral | N | 0.493695 | None | None | I |
Y/G | 0.6365 | likely_pathogenic | 0.6562 | pathogenic | -0.998 | Destabilizing | 0.975 | D | 0.521 | neutral | None | None | None | None | I |
Y/H | 0.3743 | ambiguous | 0.3653 | ambiguous | 0.18 | Stabilizing | 0.994 | D | 0.579 | neutral | N | 0.494676435 | None | None | I |
Y/I | 0.6753 | likely_pathogenic | 0.6753 | pathogenic | -0.331 | Destabilizing | 0.987 | D | 0.575 | neutral | None | None | None | None | I |
Y/K | 0.8445 | likely_pathogenic | 0.8574 | pathogenic | 0.14 | Stabilizing | 0.975 | D | 0.605 | neutral | None | None | None | None | I |
Y/L | 0.6062 | likely_pathogenic | 0.5941 | pathogenic | -0.331 | Destabilizing | 0.957 | D | 0.564 | neutral | None | None | None | None | I |
Y/M | 0.7311 | likely_pathogenic | 0.7211 | pathogenic | -0.142 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | I |
Y/N | 0.1981 | likely_benign | 0.2105 | benign | -0.054 | Destabilizing | 0.935 | D | 0.609 | neutral | N | 0.509259099 | None | None | I |
Y/P | 0.9695 | likely_pathogenic | 0.9668 | pathogenic | -0.471 | Destabilizing | 0.987 | D | 0.66 | neutral | None | None | None | None | I |
Y/Q | 0.7573 | likely_pathogenic | 0.7502 | pathogenic | -0.015 | Destabilizing | 0.987 | D | 0.571 | neutral | None | None | None | None | I |
Y/R | 0.7433 | likely_pathogenic | 0.7507 | pathogenic | 0.434 | Stabilizing | 0.987 | D | 0.613 | neutral | None | None | None | None | I |
Y/S | 0.319 | likely_benign | 0.3377 | benign | -0.557 | Destabilizing | 0.967 | D | 0.469 | neutral | N | 0.472087577 | None | None | I |
Y/T | 0.5968 | likely_pathogenic | 0.6154 | pathogenic | -0.481 | Destabilizing | 0.975 | D | 0.566 | neutral | None | None | None | None | I |
Y/V | 0.5321 | ambiguous | 0.5288 | ambiguous | -0.471 | Destabilizing | 0.987 | D | 0.515 | neutral | None | None | None | None | I |
Y/W | 0.5553 | ambiguous | 0.5537 | ambiguous | -0.436 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.