Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2701 | 8326;8327;8328 | chr2:178771226;178771225;178771224 | chr2:179635953;179635952;179635951 |
N2AB | 2701 | 8326;8327;8328 | chr2:178771226;178771225;178771224 | chr2:179635953;179635952;179635951 |
N2A | 2701 | 8326;8327;8328 | chr2:178771226;178771225;178771224 | chr2:179635953;179635952;179635951 |
N2B | 2655 | 8188;8189;8190 | chr2:178771226;178771225;178771224 | chr2:179635953;179635952;179635951 |
Novex-1 | 2655 | 8188;8189;8190 | chr2:178771226;178771225;178771224 | chr2:179635953;179635952;179635951 |
Novex-2 | 2655 | 8188;8189;8190 | chr2:178771226;178771225;178771224 | chr2:179635953;179635952;179635951 |
Novex-3 | 2701 | 8326;8327;8328 | chr2:178771226;178771225;178771224 | chr2:179635953;179635952;179635951 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs750526009 | 0.044 | 0.002 | N | 0.147 | 0.065 | 0.154104182512 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs750526009 | 0.044 | 0.002 | N | 0.147 | 0.065 | 0.154104182512 | gnomAD-4.0.0 | 1.59076E-06 | None | None | None | None | N | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs556548772 | -0.2 | 0.549 | N | 0.511 | 0.138 | 0.286465849087 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2629 | likely_benign | 0.2549 | benign | -0.338 | Destabilizing | 0.617 | D | 0.517 | neutral | None | None | None | None | N |
K/C | 0.646 | likely_pathogenic | 0.6436 | pathogenic | -0.383 | Destabilizing | 0.992 | D | 0.525 | neutral | None | None | None | None | N |
K/D | 0.4878 | ambiguous | 0.4686 | ambiguous | 0.034 | Stabilizing | 0.447 | N | 0.516 | neutral | None | None | None | None | N |
K/E | 0.1589 | likely_benign | 0.1471 | benign | 0.089 | Stabilizing | 0.334 | N | 0.531 | neutral | N | 0.473591692 | None | None | N |
K/F | 0.5582 | ambiguous | 0.5612 | ambiguous | -0.269 | Destabilizing | 0.92 | D | 0.522 | neutral | None | None | None | None | N |
K/G | 0.4226 | ambiguous | 0.412 | ambiguous | -0.639 | Destabilizing | 0.447 | N | 0.513 | neutral | None | None | None | None | N |
K/H | 0.2347 | likely_benign | 0.2325 | benign | -0.994 | Destabilizing | 0.012 | N | 0.292 | neutral | None | None | None | None | N |
K/I | 0.2066 | likely_benign | 0.2074 | benign | 0.406 | Stabilizing | 0.896 | D | 0.531 | neutral | N | 0.515332351 | None | None | N |
K/L | 0.2486 | likely_benign | 0.2405 | benign | 0.406 | Stabilizing | 0.617 | D | 0.521 | neutral | None | None | None | None | N |
K/M | 0.1617 | likely_benign | 0.1512 | benign | 0.319 | Stabilizing | 0.992 | D | 0.49 | neutral | None | None | None | None | N |
K/N | 0.2284 | likely_benign | 0.2318 | benign | -0.094 | Destabilizing | 0.002 | N | 0.147 | neutral | N | 0.452704411 | None | None | N |
K/P | 0.7664 | likely_pathogenic | 0.7499 | pathogenic | 0.188 | Stabilizing | 0.972 | D | 0.551 | neutral | None | None | None | None | N |
K/Q | 0.1137 | likely_benign | 0.1104 | benign | -0.269 | Destabilizing | 0.549 | D | 0.53 | neutral | N | 0.505261399 | None | None | N |
K/R | 0.082 | likely_benign | 0.0819 | benign | -0.323 | Destabilizing | 0.004 | N | 0.185 | neutral | N | 0.46483921 | None | None | N |
K/S | 0.2748 | likely_benign | 0.2742 | benign | -0.722 | Destabilizing | 0.25 | N | 0.511 | neutral | None | None | None | None | N |
K/T | 0.1145 | likely_benign | 0.1098 | benign | -0.483 | Destabilizing | 0.549 | D | 0.511 | neutral | N | 0.48427037 | None | None | N |
K/V | 0.2042 | likely_benign | 0.2027 | benign | 0.188 | Stabilizing | 0.92 | D | 0.514 | neutral | None | None | None | None | N |
K/W | 0.6678 | likely_pathogenic | 0.6621 | pathogenic | -0.155 | Destabilizing | 0.992 | D | 0.584 | neutral | None | None | None | None | N |
K/Y | 0.4546 | ambiguous | 0.463 | ambiguous | 0.158 | Stabilizing | 0.85 | D | 0.516 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.