Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27010 | 81253;81254;81255 | chr2:178565104;178565103;178565102 | chr2:179429831;179429830;179429829 |
N2AB | 25369 | 76330;76331;76332 | chr2:178565104;178565103;178565102 | chr2:179429831;179429830;179429829 |
N2A | 24442 | 73549;73550;73551 | chr2:178565104;178565103;178565102 | chr2:179429831;179429830;179429829 |
N2B | 17945 | 54058;54059;54060 | chr2:178565104;178565103;178565102 | chr2:179429831;179429830;179429829 |
Novex-1 | 18070 | 54433;54434;54435 | chr2:178565104;178565103;178565102 | chr2:179429831;179429830;179429829 |
Novex-2 | 18137 | 54634;54635;54636 | chr2:178565104;178565103;178565102 | chr2:179429831;179429830;179429829 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs369235214 | -2.572 | 0.999 | D | 0.591 | 0.641 | None | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.34E-05 | 0 |
V/A | rs369235214 | -2.572 | 0.999 | D | 0.591 | 0.641 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
V/A | rs369235214 | -2.572 | 0.999 | D | 0.591 | 0.641 | None | gnomAD-4.0.0 | 2.10731E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6279E-05 | 0 | 4.80415E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8045 | likely_pathogenic | 0.768 | pathogenic | -2.545 | Highly Destabilizing | 0.999 | D | 0.591 | neutral | D | 0.539337666 | None | None | N |
V/C | 0.9735 | likely_pathogenic | 0.955 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/D | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -3.509 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/E | 0.9971 | likely_pathogenic | 0.9976 | pathogenic | -3.165 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.562810745 | None | None | N |
V/F | 0.9326 | likely_pathogenic | 0.918 | pathogenic | -1.472 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
V/G | 0.9685 | likely_pathogenic | 0.9636 | pathogenic | -3.176 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | D | 0.562810745 | None | None | N |
V/H | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -3.093 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/I | 0.0965 | likely_benign | 0.097 | benign | -0.687 | Destabilizing | 0.997 | D | 0.565 | neutral | N | 0.503824354 | None | None | N |
V/K | 0.9979 | likely_pathogenic | 0.9982 | pathogenic | -2.111 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/L | 0.5474 | ambiguous | 0.5112 | ambiguous | -0.687 | Destabilizing | 0.997 | D | 0.605 | neutral | N | 0.48361196 | None | None | N |
V/M | 0.7469 | likely_pathogenic | 0.6731 | pathogenic | -0.95 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/N | 0.9978 | likely_pathogenic | 0.9977 | pathogenic | -2.896 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/P | 0.9961 | likely_pathogenic | 0.9974 | pathogenic | -1.291 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/Q | 0.9965 | likely_pathogenic | 0.9966 | pathogenic | -2.473 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/R | 0.995 | likely_pathogenic | 0.996 | pathogenic | -2.279 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/S | 0.9783 | likely_pathogenic | 0.9731 | pathogenic | -3.374 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/T | 0.8665 | likely_pathogenic | 0.8463 | pathogenic | -2.862 | Highly Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
V/W | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -2.014 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/Y | 0.9967 | likely_pathogenic | 0.9959 | pathogenic | -1.744 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.