Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27019 | 81280;81281;81282 | chr2:178565077;178565076;178565075 | chr2:179429804;179429803;179429802 |
N2AB | 25378 | 76357;76358;76359 | chr2:178565077;178565076;178565075 | chr2:179429804;179429803;179429802 |
N2A | 24451 | 73576;73577;73578 | chr2:178565077;178565076;178565075 | chr2:179429804;179429803;179429802 |
N2B | 17954 | 54085;54086;54087 | chr2:178565077;178565076;178565075 | chr2:179429804;179429803;179429802 |
Novex-1 | 18079 | 54460;54461;54462 | chr2:178565077;178565076;178565075 | chr2:179429804;179429803;179429802 |
Novex-2 | 18146 | 54661;54662;54663 | chr2:178565077;178565076;178565075 | chr2:179429804;179429803;179429802 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs531674020 | -0.523 | 0.027 | N | 0.276 | 0.085 | 0.107399877778 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/S | rs531674020 | -0.523 | 0.027 | N | 0.276 | 0.085 | 0.107399877778 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
T/S | rs531674020 | -0.523 | 0.027 | N | 0.276 | 0.085 | 0.107399877778 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8591E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0637 | likely_benign | 0.0637 | benign | -0.609 | Destabilizing | None | N | 0.087 | neutral | N | 0.443213039 | None | None | N |
T/C | 0.3631 | ambiguous | 0.342 | ambiguous | -0.227 | Destabilizing | 0.935 | D | 0.224 | neutral | None | None | None | None | N |
T/D | 0.3403 | ambiguous | 0.3678 | ambiguous | -0.051 | Destabilizing | 0.081 | N | 0.223 | neutral | None | None | None | None | N |
T/E | 0.3066 | likely_benign | 0.3345 | benign | -0.094 | Destabilizing | 0.081 | N | 0.212 | neutral | None | None | None | None | N |
T/F | 0.2262 | likely_benign | 0.2313 | benign | -0.833 | Destabilizing | 0.38 | N | 0.287 | neutral | None | None | None | None | N |
T/G | 0.1846 | likely_benign | 0.1837 | benign | -0.809 | Destabilizing | 0.035 | N | 0.232 | neutral | None | None | None | None | N |
T/H | 0.2572 | likely_benign | 0.254 | benign | -1.032 | Destabilizing | 0.38 | N | 0.262 | neutral | None | None | None | None | N |
T/I | 0.1163 | likely_benign | 0.1283 | benign | -0.182 | Destabilizing | 0.062 | N | 0.28 | neutral | N | 0.497490241 | None | None | N |
T/K | 0.2832 | likely_benign | 0.2996 | benign | -0.643 | Destabilizing | 0.081 | N | 0.213 | neutral | None | None | None | None | N |
T/L | 0.0801 | likely_benign | 0.0862 | benign | -0.182 | Destabilizing | 0.001 | N | 0.225 | neutral | None | None | None | None | N |
T/M | 0.0911 | likely_benign | 0.0881 | benign | 0.017 | Stabilizing | 0.38 | N | 0.223 | neutral | None | None | None | None | N |
T/N | 0.0919 | likely_benign | 0.092 | benign | -0.364 | Destabilizing | None | N | 0.098 | neutral | N | 0.436748427 | None | None | N |
T/P | 0.4172 | ambiguous | 0.4319 | ambiguous | -0.294 | Destabilizing | 0.484 | N | 0.255 | neutral | N | 0.511880903 | None | None | N |
T/Q | 0.2381 | likely_benign | 0.2366 | benign | -0.552 | Destabilizing | 0.38 | N | 0.261 | neutral | None | None | None | None | N |
T/R | 0.2638 | likely_benign | 0.2806 | benign | -0.333 | Destabilizing | 0.38 | N | 0.272 | neutral | None | None | None | None | N |
T/S | 0.0842 | likely_benign | 0.084 | benign | -0.589 | Destabilizing | 0.027 | N | 0.276 | neutral | N | 0.456024834 | None | None | N |
T/V | 0.0862 | likely_benign | 0.0923 | benign | -0.294 | Destabilizing | 0.035 | N | 0.207 | neutral | None | None | None | None | N |
T/W | 0.6766 | likely_pathogenic | 0.6839 | pathogenic | -0.822 | Destabilizing | 0.935 | D | 0.33 | neutral | None | None | None | None | N |
T/Y | 0.2966 | likely_benign | 0.2957 | benign | -0.597 | Destabilizing | 0.791 | D | 0.269 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.