Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27035 | 81328;81329;81330 | chr2:178565029;178565028;178565027 | chr2:179429756;179429755;179429754 |
N2AB | 25394 | 76405;76406;76407 | chr2:178565029;178565028;178565027 | chr2:179429756;179429755;179429754 |
N2A | 24467 | 73624;73625;73626 | chr2:178565029;178565028;178565027 | chr2:179429756;179429755;179429754 |
N2B | 17970 | 54133;54134;54135 | chr2:178565029;178565028;178565027 | chr2:179429756;179429755;179429754 |
Novex-1 | 18095 | 54508;54509;54510 | chr2:178565029;178565028;178565027 | chr2:179429756;179429755;179429754 |
Novex-2 | 18162 | 54709;54710;54711 | chr2:178565029;178565028;178565027 | chr2:179429756;179429755;179429754 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1705169163 | None | None | N | 0.179 | 0.058 | 0.137902524267 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs1705169163 | None | None | N | 0.179 | 0.058 | 0.137902524267 | gnomAD-4.0.0 | 6.57575E-06 | None | None | None | None | N | None | 0 | 6.55824E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0882 | likely_benign | 0.0788 | benign | -0.601 | Destabilizing | 0.055 | N | 0.443 | neutral | N | 0.519599096 | None | None | N |
T/C | 0.3288 | likely_benign | 0.2894 | benign | -0.459 | Destabilizing | 0.909 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/D | 0.6461 | likely_pathogenic | 0.6417 | pathogenic | 0.094 | Stabilizing | 0.157 | N | 0.602 | neutral | None | None | None | None | N |
T/E | 0.5934 | likely_pathogenic | 0.5956 | pathogenic | 0.114 | Stabilizing | 0.157 | N | 0.605 | neutral | None | None | None | None | N |
T/F | 0.3833 | ambiguous | 0.3269 | benign | -0.645 | Destabilizing | 0.726 | D | 0.741 | deleterious | None | None | None | None | N |
T/G | 0.1638 | likely_benign | 0.1192 | benign | -0.862 | Destabilizing | 0.157 | N | 0.607 | neutral | None | None | None | None | N |
T/H | 0.3708 | ambiguous | 0.3524 | ambiguous | -1.032 | Destabilizing | 0.909 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/I | 0.2681 | likely_benign | 0.2026 | benign | 0.003 | Stabilizing | 0.497 | N | 0.695 | prob.neutral | N | 0.484325387 | None | None | N |
T/K | 0.4194 | ambiguous | 0.4447 | ambiguous | -0.564 | Destabilizing | 0.157 | N | 0.601 | neutral | None | None | None | None | N |
T/L | 0.1171 | likely_benign | 0.1014 | benign | 0.003 | Stabilizing | 0.272 | N | 0.605 | neutral | None | None | None | None | N |
T/M | 0.1083 | likely_benign | 0.0946 | benign | -0.032 | Destabilizing | 0.968 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/N | 0.1314 | likely_benign | 0.1178 | benign | -0.59 | Destabilizing | 0.124 | N | 0.522 | neutral | N | 0.477271041 | None | None | N |
T/P | 0.0832 | likely_benign | 0.0749 | benign | -0.165 | Destabilizing | 0.002 | N | 0.323 | neutral | N | 0.51925238 | None | None | N |
T/Q | 0.3279 | likely_benign | 0.3169 | benign | -0.643 | Destabilizing | 0.567 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/R | 0.3785 | ambiguous | 0.4125 | ambiguous | -0.389 | Destabilizing | 0.567 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/S | 0.103 | likely_benign | 0.0905 | benign | -0.856 | Destabilizing | None | N | 0.179 | neutral | N | 0.45547026 | None | None | N |
T/V | 0.1754 | likely_benign | 0.1414 | benign | -0.165 | Destabilizing | 0.272 | N | 0.501 | neutral | None | None | None | None | N |
T/W | 0.7096 | likely_pathogenic | 0.6615 | pathogenic | -0.655 | Destabilizing | 0.968 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/Y | 0.3992 | ambiguous | 0.352 | ambiguous | -0.382 | Destabilizing | 0.726 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.