Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27048 | 81367;81368;81369 | chr2:178564990;178564989;178564988 | chr2:179429717;179429716;179429715 |
N2AB | 25407 | 76444;76445;76446 | chr2:178564990;178564989;178564988 | chr2:179429717;179429716;179429715 |
N2A | 24480 | 73663;73664;73665 | chr2:178564990;178564989;178564988 | chr2:179429717;179429716;179429715 |
N2B | 17983 | 54172;54173;54174 | chr2:178564990;178564989;178564988 | chr2:179429717;179429716;179429715 |
Novex-1 | 18108 | 54547;54548;54549 | chr2:178564990;178564989;178564988 | chr2:179429717;179429716;179429715 |
Novex-2 | 18175 | 54748;54749;54750 | chr2:178564990;178564989;178564988 | chr2:179429717;179429716;179429715 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.005 | N | 0.431 | 0.136 | 0.357519025918 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
F/S | None | None | None | N | 0.5 | 0.14 | 0.261217442401 | gnomAD-4.0.0 | 1.59558E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8638E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2463 | likely_benign | 0.2605 | benign | -3.631 | Highly Destabilizing | None | N | 0.507 | neutral | None | None | None | None | N |
F/C | 0.1312 | likely_benign | 0.1239 | benign | -2.096 | Highly Destabilizing | None | N | 0.517 | neutral | N | 0.511880903 | None | None | N |
F/D | 0.7874 | likely_pathogenic | 0.7848 | pathogenic | -3.803 | Highly Destabilizing | 0.072 | N | 0.74 | deleterious | None | None | None | None | N |
F/E | 0.796 | likely_pathogenic | 0.7898 | pathogenic | -3.643 | Highly Destabilizing | 0.016 | N | 0.709 | prob.delet. | None | None | None | None | N |
F/G | 0.6058 | likely_pathogenic | 0.5864 | pathogenic | -3.997 | Highly Destabilizing | 0.016 | N | 0.719 | prob.delet. | None | None | None | None | N |
F/H | 0.299 | likely_benign | 0.2902 | benign | -2.279 | Highly Destabilizing | None | N | 0.641 | neutral | None | None | None | None | N |
F/I | 0.2116 | likely_benign | 0.2045 | benign | -2.408 | Highly Destabilizing | 0.012 | N | 0.537 | neutral | N | 0.461182724 | None | None | N |
F/K | 0.7484 | likely_pathogenic | 0.7491 | pathogenic | -2.491 | Highly Destabilizing | None | N | 0.611 | neutral | None | None | None | None | N |
F/L | 0.6931 | likely_pathogenic | 0.6516 | pathogenic | -2.408 | Highly Destabilizing | 0.005 | N | 0.431 | neutral | N | 0.498180887 | None | None | N |
F/M | 0.3533 | ambiguous | 0.3348 | benign | -1.933 | Destabilizing | 0.356 | N | 0.641 | neutral | None | None | None | None | N |
F/N | 0.4673 | ambiguous | 0.453 | ambiguous | -2.815 | Highly Destabilizing | 0.072 | N | 0.742 | deleterious | None | None | None | None | N |
F/P | 0.9958 | likely_pathogenic | 0.9951 | pathogenic | -2.829 | Highly Destabilizing | 0.136 | N | 0.762 | deleterious | None | None | None | None | N |
F/Q | 0.5695 | likely_pathogenic | 0.5434 | ambiguous | -2.911 | Highly Destabilizing | 0.072 | N | 0.758 | deleterious | None | None | None | None | N |
F/R | 0.5441 | ambiguous | 0.5555 | ambiguous | -1.678 | Destabilizing | 0.038 | N | 0.733 | prob.delet. | None | None | None | None | N |
F/S | 0.1624 | likely_benign | 0.1737 | benign | -3.419 | Highly Destabilizing | None | N | 0.5 | neutral | N | 0.446098629 | None | None | N |
F/T | 0.2827 | likely_benign | 0.2893 | benign | -3.174 | Highly Destabilizing | 0.016 | N | 0.702 | prob.neutral | None | None | None | None | N |
F/V | 0.1843 | likely_benign | 0.1732 | benign | -2.829 | Highly Destabilizing | None | N | 0.467 | neutral | N | 0.452043166 | None | None | N |
F/W | 0.3995 | ambiguous | 0.3964 | ambiguous | -1.099 | Destabilizing | 0.356 | N | 0.659 | neutral | None | None | None | None | N |
F/Y | 0.1113 | likely_benign | 0.1023 | benign | -1.566 | Destabilizing | None | N | 0.243 | neutral | N | 0.458950496 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.