Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27061 | 81406;81407;81408 | chr2:178564951;178564950;178564949 | chr2:179429678;179429677;179429676 |
N2AB | 25420 | 76483;76484;76485 | chr2:178564951;178564950;178564949 | chr2:179429678;179429677;179429676 |
N2A | 24493 | 73702;73703;73704 | chr2:178564951;178564950;178564949 | chr2:179429678;179429677;179429676 |
N2B | 17996 | 54211;54212;54213 | chr2:178564951;178564950;178564949 | chr2:179429678;179429677;179429676 |
Novex-1 | 18121 | 54586;54587;54588 | chr2:178564951;178564950;178564949 | chr2:179429678;179429677;179429676 |
Novex-2 | 18188 | 54787;54788;54789 | chr2:178564951;178564950;178564949 | chr2:179429678;179429677;179429676 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs773739899 | -0.169 | 0.999 | N | 0.821 | 0.519 | 0.350524144436 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11732E-04 | None | 0 | None | 0 | 0 | 0 |
S/P | rs773739899 | -0.169 | 0.999 | N | 0.821 | 0.519 | 0.350524144436 | gnomAD-4.0.0 | 3.19036E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54877E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4667 | ambiguous | 0.4364 | ambiguous | -0.468 | Destabilizing | 0.994 | D | 0.671 | prob.neutral | N | 0.484546559 | None | None | N |
S/C | 0.4207 | ambiguous | 0.4176 | ambiguous | -0.259 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.530758702 | None | None | N |
S/D | 0.9714 | likely_pathogenic | 0.9746 | pathogenic | -0.597 | Destabilizing | 0.998 | D | 0.655 | prob.neutral | None | None | None | None | N |
S/E | 0.9901 | likely_pathogenic | 0.9908 | pathogenic | -0.431 | Destabilizing | 0.998 | D | 0.657 | prob.neutral | None | None | None | None | N |
S/F | 0.9742 | likely_pathogenic | 0.9756 | pathogenic | -0.369 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.523921847 | None | None | N |
S/G | 0.4384 | ambiguous | 0.411 | ambiguous | -0.86 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
S/H | 0.9647 | likely_pathogenic | 0.9662 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
S/I | 0.9436 | likely_pathogenic | 0.9387 | pathogenic | 0.512 | Stabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
S/K | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -0.029 | Destabilizing | 0.998 | D | 0.655 | prob.neutral | None | None | None | None | N |
S/L | 0.816 | likely_pathogenic | 0.8157 | pathogenic | 0.512 | Stabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
S/M | 0.8744 | likely_pathogenic | 0.8633 | pathogenic | 0.361 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
S/N | 0.901 | likely_pathogenic | 0.9045 | pathogenic | -0.61 | Destabilizing | 0.998 | D | 0.687 | prob.delet. | None | None | None | None | N |
S/P | 0.9877 | likely_pathogenic | 0.9897 | pathogenic | 0.222 | Stabilizing | 0.999 | D | 0.821 | deleterious | N | 0.48903001 | None | None | N |
S/Q | 0.986 | likely_pathogenic | 0.9871 | pathogenic | -0.389 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
S/R | 0.9968 | likely_pathogenic | 0.9973 | pathogenic | -0.372 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
S/T | 0.2606 | likely_benign | 0.2594 | benign | -0.36 | Destabilizing | 0.997 | D | 0.671 | prob.neutral | N | 0.513236058 | None | None | N |
S/V | 0.8806 | likely_pathogenic | 0.875 | pathogenic | 0.222 | Stabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
S/W | 0.9798 | likely_pathogenic | 0.9814 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
S/Y | 0.9658 | likely_pathogenic | 0.9682 | pathogenic | -0.118 | Destabilizing | 0.999 | D | 0.841 | deleterious | D | 0.541772613 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.