Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27082 | 81469;81470;81471 | chr2:178564888;178564887;178564886 | chr2:179429615;179429614;179429613 |
N2AB | 25441 | 76546;76547;76548 | chr2:178564888;178564887;178564886 | chr2:179429615;179429614;179429613 |
N2A | 24514 | 73765;73766;73767 | chr2:178564888;178564887;178564886 | chr2:179429615;179429614;179429613 |
N2B | 18017 | 54274;54275;54276 | chr2:178564888;178564887;178564886 | chr2:179429615;179429614;179429613 |
Novex-1 | 18142 | 54649;54650;54651 | chr2:178564888;178564887;178564886 | chr2:179429615;179429614;179429613 |
Novex-2 | 18209 | 54850;54851;54852 | chr2:178564888;178564887;178564886 | chr2:179429615;179429614;179429613 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs368265185 | 0.097 | 0.968 | N | 0.605 | 0.326 | None | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
T/I | rs368265185 | 0.097 | 0.968 | N | 0.605 | 0.326 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs368265185 | 0.097 | 0.968 | N | 0.605 | 0.326 | None | gnomAD-4.0.0 | 1.36456E-05 | None | None | None | None | N | None | 2.67458E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69578E-05 | 0 | 0 |
T/K | rs368265185 | None | 0.896 | N | 0.577 | 0.265 | 0.389750110748 | gnomAD-4.0.0 | 6.84878E-07 | None | None | None | None | N | None | 2.99976E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0828 | likely_benign | 0.0783 | benign | -0.694 | Destabilizing | 0.011 | N | 0.153 | neutral | N | 0.503186849 | None | None | N |
T/C | 0.3369 | likely_benign | 0.2931 | benign | -0.437 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
T/D | 0.3666 | ambiguous | 0.3565 | ambiguous | 0.445 | Stabilizing | 0.976 | D | 0.603 | neutral | None | None | None | None | N |
T/E | 0.3004 | likely_benign | 0.2855 | benign | 0.463 | Stabilizing | 0.919 | D | 0.579 | neutral | None | None | None | None | N |
T/F | 0.2271 | likely_benign | 0.2048 | benign | -0.836 | Destabilizing | 0.988 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/G | 0.2305 | likely_benign | 0.2132 | benign | -0.941 | Destabilizing | 0.851 | D | 0.615 | neutral | None | None | None | None | N |
T/H | 0.2682 | likely_benign | 0.245 | benign | -1.031 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/I | 0.1385 | likely_benign | 0.1305 | benign | -0.131 | Destabilizing | 0.968 | D | 0.605 | neutral | N | 0.490988343 | None | None | N |
T/K | 0.2369 | likely_benign | 0.2236 | benign | -0.329 | Destabilizing | 0.896 | D | 0.577 | neutral | N | 0.511035541 | None | None | N |
T/L | 0.0927 | likely_benign | 0.0882 | benign | -0.131 | Destabilizing | 0.919 | D | 0.578 | neutral | None | None | None | None | N |
T/M | 0.1033 | likely_benign | 0.0961 | benign | -0.126 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
T/N | 0.1272 | likely_benign | 0.1235 | benign | -0.375 | Destabilizing | 0.976 | D | 0.542 | neutral | None | None | None | None | N |
T/P | 0.2557 | likely_benign | 0.3091 | benign | -0.286 | Destabilizing | 0.984 | D | 0.646 | neutral | N | 0.473854454 | None | None | N |
T/Q | 0.2519 | likely_benign | 0.2251 | benign | -0.429 | Destabilizing | 0.988 | D | 0.671 | neutral | None | None | None | None | N |
T/R | 0.2257 | likely_benign | 0.2078 | benign | -0.164 | Destabilizing | 0.968 | D | 0.659 | neutral | N | 0.472080028 | None | None | N |
T/S | 0.1026 | likely_benign | 0.0947 | benign | -0.727 | Destabilizing | 0.103 | N | 0.16 | neutral | N | 0.429590381 | None | None | N |
T/V | 0.1057 | likely_benign | 0.0996 | benign | -0.286 | Destabilizing | 0.851 | D | 0.505 | neutral | None | None | None | None | N |
T/W | 0.6501 | likely_pathogenic | 0.6098 | pathogenic | -0.805 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
T/Y | 0.2735 | likely_benign | 0.249 | benign | -0.523 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.