Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2709 | 8350;8351;8352 | chr2:178770667;178770666;178770665 | chr2:179635394;179635393;179635392 |
N2AB | 2709 | 8350;8351;8352 | chr2:178770667;178770666;178770665 | chr2:179635394;179635393;179635392 |
N2A | 2709 | 8350;8351;8352 | chr2:178770667;178770666;178770665 | chr2:179635394;179635393;179635392 |
N2B | 2663 | 8212;8213;8214 | chr2:178770667;178770666;178770665 | chr2:179635394;179635393;179635392 |
Novex-1 | 2663 | 8212;8213;8214 | chr2:178770667;178770666;178770665 | chr2:179635394;179635393;179635392 |
Novex-2 | 2663 | 8212;8213;8214 | chr2:178770667;178770666;178770665 | chr2:179635394;179635393;179635392 |
Novex-3 | 2709 | 8350;8351;8352 | chr2:178770667;178770666;178770665 | chr2:179635394;179635393;179635392 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs2091328773 | None | 0.991 | D | 0.797 | 0.716 | 0.854516633281 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/S | rs2091328773 | None | 0.991 | D | 0.797 | 0.716 | 0.854516633281 | gnomAD-4.0.0 | 6.56978E-06 | None | None | None | None | N | None | 0 | 6.5445E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8579 | likely_pathogenic | 0.9443 | pathogenic | -1.871 | Destabilizing | 0.91 | D | 0.628 | neutral | None | None | None | None | N |
I/C | 0.9141 | likely_pathogenic | 0.9611 | pathogenic | -1.253 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/D | 0.9745 | likely_pathogenic | 0.9928 | pathogenic | -1.233 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
I/E | 0.9285 | likely_pathogenic | 0.9774 | pathogenic | -1.133 | Destabilizing | 0.993 | D | 0.836 | deleterious | None | None | None | None | N |
I/F | 0.3148 | likely_benign | 0.421 | ambiguous | -1.029 | Destabilizing | 0.982 | D | 0.698 | prob.neutral | N | 0.493596821 | None | None | N |
I/G | 0.9447 | likely_pathogenic | 0.9799 | pathogenic | -2.302 | Highly Destabilizing | 0.993 | D | 0.825 | deleterious | None | None | None | None | N |
I/H | 0.9285 | likely_pathogenic | 0.9756 | pathogenic | -1.485 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
I/K | 0.8789 | likely_pathogenic | 0.9563 | pathogenic | -1.408 | Destabilizing | 0.993 | D | 0.837 | deleterious | None | None | None | None | N |
I/L | 0.1988 | likely_benign | 0.2422 | benign | -0.71 | Destabilizing | 0.58 | D | 0.499 | neutral | N | 0.518343889 | None | None | N |
I/M | 0.1635 | likely_benign | 0.2097 | benign | -0.647 | Destabilizing | 0.991 | D | 0.661 | neutral | D | 0.646050176 | None | None | N |
I/N | 0.7794 | likely_pathogenic | 0.9147 | pathogenic | -1.382 | Destabilizing | 0.997 | D | 0.835 | deleterious | D | 0.64919443 | None | None | N |
I/P | 0.8958 | likely_pathogenic | 0.9544 | pathogenic | -1.068 | Destabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | N |
I/Q | 0.8778 | likely_pathogenic | 0.9565 | pathogenic | -1.399 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
I/R | 0.8322 | likely_pathogenic | 0.9366 | pathogenic | -0.962 | Destabilizing | 0.993 | D | 0.841 | deleterious | None | None | None | None | N |
I/S | 0.8527 | likely_pathogenic | 0.9488 | pathogenic | -2.108 | Highly Destabilizing | 0.991 | D | 0.797 | deleterious | D | 0.648367825 | None | None | N |
I/T | 0.8453 | likely_pathogenic | 0.942 | pathogenic | -1.871 | Destabilizing | 0.939 | D | 0.725 | prob.delet. | D | 0.647892974 | None | None | N |
I/V | 0.1329 | likely_benign | 0.1764 | benign | -1.068 | Destabilizing | 0.02 | N | 0.283 | neutral | N | 0.50872146 | None | None | N |
I/W | 0.8896 | likely_pathogenic | 0.9447 | pathogenic | -1.188 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
I/Y | 0.7409 | likely_pathogenic | 0.8586 | pathogenic | -0.95 | Destabilizing | 0.993 | D | 0.714 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.