Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27114 | 81565;81566;81567 | chr2:178564792;178564791;178564790 | chr2:179429519;179429518;179429517 |
N2AB | 25473 | 76642;76643;76644 | chr2:178564792;178564791;178564790 | chr2:179429519;179429518;179429517 |
N2A | 24546 | 73861;73862;73863 | chr2:178564792;178564791;178564790 | chr2:179429519;179429518;179429517 |
N2B | 18049 | 54370;54371;54372 | chr2:178564792;178564791;178564790 | chr2:179429519;179429518;179429517 |
Novex-1 | 18174 | 54745;54746;54747 | chr2:178564792;178564791;178564790 | chr2:179429519;179429518;179429517 |
Novex-2 | 18241 | 54946;54947;54948 | chr2:178564792;178564791;178564790 | chr2:179429519;179429518;179429517 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.967 | D | 0.474 | 0.295 | 0.30212335484 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
K/Q | rs962009573 | None | 0.967 | N | 0.507 | 0.319 | 0.340992353424 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/Q | rs962009573 | None | 0.967 | N | 0.507 | 0.319 | 0.340992353424 | gnomAD-4.0.0 | 4.34183E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93662E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8033 | likely_pathogenic | 0.7654 | pathogenic | -0.348 | Destabilizing | 0.916 | D | 0.521 | neutral | None | None | None | None | N |
K/C | 0.8915 | likely_pathogenic | 0.8622 | pathogenic | -0.319 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/D | 0.9503 | likely_pathogenic | 0.9447 | pathogenic | -0.533 | Destabilizing | 0.987 | D | 0.531 | neutral | None | None | None | None | N |
K/E | 0.6687 | likely_pathogenic | 0.6164 | pathogenic | -0.464 | Destabilizing | 0.892 | D | 0.493 | neutral | N | 0.515921286 | None | None | N |
K/F | 0.9656 | likely_pathogenic | 0.9582 | pathogenic | -0.21 | Destabilizing | 0.975 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/G | 0.8221 | likely_pathogenic | 0.8014 | pathogenic | -0.688 | Destabilizing | 0.987 | D | 0.565 | neutral | None | None | None | None | N |
K/H | 0.6705 | likely_pathogenic | 0.6209 | pathogenic | -1.184 | Destabilizing | 0.997 | D | 0.525 | neutral | None | None | None | None | N |
K/I | 0.7621 | likely_pathogenic | 0.7098 | pathogenic | 0.516 | Stabilizing | 0.073 | N | 0.492 | neutral | None | None | None | None | N |
K/L | 0.7399 | likely_pathogenic | 0.698 | pathogenic | 0.516 | Stabilizing | 0.653 | D | 0.563 | neutral | None | None | None | None | N |
K/M | 0.6276 | likely_pathogenic | 0.5548 | ambiguous | 0.58 | Stabilizing | 0.991 | D | 0.522 | neutral | N | 0.48969053 | None | None | N |
K/N | 0.8585 | likely_pathogenic | 0.8342 | pathogenic | -0.428 | Destabilizing | 0.967 | D | 0.474 | neutral | D | 0.523754123 | None | None | N |
K/P | 0.9305 | likely_pathogenic | 0.9337 | pathogenic | 0.258 | Stabilizing | 0.996 | D | 0.528 | neutral | None | None | None | None | N |
K/Q | 0.3627 | ambiguous | 0.3179 | benign | -0.586 | Destabilizing | 0.967 | D | 0.507 | neutral | N | 0.474104263 | None | None | N |
K/R | 0.074 | likely_benign | 0.0717 | benign | -0.636 | Destabilizing | 0.056 | N | 0.215 | neutral | N | 0.464956535 | None | None | N |
K/S | 0.8834 | likely_pathogenic | 0.8567 | pathogenic | -0.931 | Destabilizing | 0.916 | D | 0.476 | neutral | None | None | None | None | N |
K/T | 0.673 | likely_pathogenic | 0.5946 | pathogenic | -0.68 | Destabilizing | 0.967 | D | 0.489 | neutral | N | 0.516094644 | None | None | N |
K/V | 0.728 | likely_pathogenic | 0.6753 | pathogenic | 0.258 | Stabilizing | 0.653 | D | 0.575 | neutral | None | None | None | None | N |
K/W | 0.9345 | likely_pathogenic | 0.9205 | pathogenic | -0.156 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/Y | 0.9003 | likely_pathogenic | 0.8809 | pathogenic | 0.164 | Stabilizing | 0.987 | D | 0.662 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.