Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27133 | 81622;81623;81624 | chr2:178564735;178564734;178564733 | chr2:179429462;179429461;179429460 |
N2AB | 25492 | 76699;76700;76701 | chr2:178564735;178564734;178564733 | chr2:179429462;179429461;179429460 |
N2A | 24565 | 73918;73919;73920 | chr2:178564735;178564734;178564733 | chr2:179429462;179429461;179429460 |
N2B | 18068 | 54427;54428;54429 | chr2:178564735;178564734;178564733 | chr2:179429462;179429461;179429460 |
Novex-1 | 18193 | 54802;54803;54804 | chr2:178564735;178564734;178564733 | chr2:179429462;179429461;179429460 |
Novex-2 | 18260 | 55003;55004;55005 | chr2:178564735;178564734;178564733 | chr2:179429462;179429461;179429460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.014 | N | 0.338 | 0.189 | 0.24896430686 | gnomAD-4.0.0 | 1.59287E-06 | None | None | None | None | N | None | 0 | 2.29043E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.014 | N | 0.213 | 0.065 | 0.183819452728 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6476 | likely_pathogenic | 0.6536 | pathogenic | -0.472 | Destabilizing | 0.86 | D | 0.572 | neutral | None | None | None | None | N |
K/C | 0.7544 | likely_pathogenic | 0.7493 | pathogenic | -0.535 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/D | 0.9204 | likely_pathogenic | 0.9228 | pathogenic | 0.156 | Stabilizing | 0.754 | D | 0.635 | neutral | None | None | None | None | N |
K/E | 0.4886 | ambiguous | 0.5118 | ambiguous | 0.249 | Stabilizing | 0.014 | N | 0.338 | neutral | N | 0.464999229 | None | None | N |
K/F | 0.8804 | likely_pathogenic | 0.8732 | pathogenic | -0.275 | Destabilizing | 0.993 | D | 0.74 | deleterious | None | None | None | None | N |
K/G | 0.8271 | likely_pathogenic | 0.828 | pathogenic | -0.799 | Destabilizing | 0.86 | D | 0.643 | neutral | None | None | None | None | N |
K/H | 0.4188 | ambiguous | 0.4059 | ambiguous | -1.062 | Destabilizing | 0.994 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/I | 0.4689 | ambiguous | 0.4758 | ambiguous | 0.353 | Stabilizing | 0.97 | D | 0.744 | deleterious | N | 0.48057227 | None | None | N |
K/L | 0.4885 | ambiguous | 0.4852 | ambiguous | 0.353 | Stabilizing | 0.956 | D | 0.646 | neutral | None | None | None | None | N |
K/M | 0.3865 | ambiguous | 0.3994 | ambiguous | 0.144 | Stabilizing | 0.998 | D | 0.675 | neutral | None | None | None | None | N |
K/N | 0.8048 | likely_pathogenic | 0.8131 | pathogenic | -0.276 | Destabilizing | 0.942 | D | 0.556 | neutral | N | 0.472178479 | None | None | N |
K/P | 0.8498 | likely_pathogenic | 0.8525 | pathogenic | 0.109 | Stabilizing | 0.978 | D | 0.704 | prob.neutral | None | None | None | None | N |
K/Q | 0.2143 | likely_benign | 0.2227 | benign | -0.345 | Destabilizing | 0.89 | D | 0.555 | neutral | N | 0.472178479 | None | None | N |
K/R | 0.0826 | likely_benign | 0.0781 | benign | -0.413 | Destabilizing | 0.014 | N | 0.213 | neutral | N | 0.483944941 | None | None | N |
K/S | 0.7368 | likely_pathogenic | 0.7397 | pathogenic | -0.936 | Destabilizing | 0.86 | D | 0.518 | neutral | None | None | None | None | N |
K/T | 0.3666 | ambiguous | 0.3765 | ambiguous | -0.642 | Destabilizing | 0.942 | D | 0.67 | neutral | N | 0.466719043 | None | None | N |
K/V | 0.4588 | ambiguous | 0.4581 | ambiguous | 0.109 | Stabilizing | 0.978 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/W | 0.8467 | likely_pathogenic | 0.821 | pathogenic | -0.162 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/Y | 0.7633 | likely_pathogenic | 0.749 | pathogenic | 0.129 | Stabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.