Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27144 | 81655;81656;81657 | chr2:178564702;178564701;178564700 | chr2:179429429;179429428;179429427 |
N2AB | 25503 | 76732;76733;76734 | chr2:178564702;178564701;178564700 | chr2:179429429;179429428;179429427 |
N2A | 24576 | 73951;73952;73953 | chr2:178564702;178564701;178564700 | chr2:179429429;179429428;179429427 |
N2B | 18079 | 54460;54461;54462 | chr2:178564702;178564701;178564700 | chr2:179429429;179429428;179429427 |
Novex-1 | 18204 | 54835;54836;54837 | chr2:178564702;178564701;178564700 | chr2:179429429;179429428;179429427 |
Novex-2 | 18271 | 55036;55037;55038 | chr2:178564702;178564701;178564700 | chr2:179429429;179429428;179429427 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs794729512 | None | 1.0 | D | 0.755 | 0.561 | 0.63502316858 | gnomAD-4.0.0 | 8.40225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3943 | ambiguous | 0.4046 | ambiguous | -0.872 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | N | 0.4985913 | None | None | N |
E/C | 0.8787 | likely_pathogenic | 0.8933 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/D | 0.8037 | likely_pathogenic | 0.7927 | pathogenic | -1.471 | Destabilizing | 0.999 | D | 0.588 | neutral | N | 0.496060086 | None | None | N |
E/F | 0.9069 | likely_pathogenic | 0.9205 | pathogenic | -0.472 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
E/G | 0.6929 | likely_pathogenic | 0.6941 | pathogenic | -1.323 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.535813768 | None | None | N |
E/H | 0.8762 | likely_pathogenic | 0.8848 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/I | 0.6241 | likely_pathogenic | 0.6578 | pathogenic | 0.411 | Stabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
E/K | 0.7341 | likely_pathogenic | 0.7348 | pathogenic | -0.842 | Destabilizing | 0.999 | D | 0.646 | neutral | N | 0.476586251 | None | None | N |
E/L | 0.7387 | likely_pathogenic | 0.7661 | pathogenic | 0.411 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
E/M | 0.6131 | likely_pathogenic | 0.6426 | pathogenic | 1.104 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/N | 0.8166 | likely_pathogenic | 0.8169 | pathogenic | -1.278 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/P | 0.9981 | likely_pathogenic | 0.9981 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Q | 0.2262 | likely_benign | 0.2423 | benign | -0.911 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.488486756 | None | None | N |
E/R | 0.8017 | likely_pathogenic | 0.8026 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/S | 0.5017 | ambiguous | 0.5039 | ambiguous | -1.884 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/T | 0.5219 | ambiguous | 0.5433 | ambiguous | -1.451 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/V | 0.4566 | ambiguous | 0.4957 | ambiguous | 0.001 | Stabilizing | 1.0 | D | 0.777 | deleterious | N | 0.476345989 | None | None | N |
E/W | 0.9879 | likely_pathogenic | 0.9879 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/Y | 0.8965 | likely_pathogenic | 0.9071 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.