Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27165 | 81718;81719;81720 | chr2:178564639;178564638;178564637 | chr2:179429366;179429365;179429364 |
N2AB | 25524 | 76795;76796;76797 | chr2:178564639;178564638;178564637 | chr2:179429366;179429365;179429364 |
N2A | 24597 | 74014;74015;74016 | chr2:178564639;178564638;178564637 | chr2:179429366;179429365;179429364 |
N2B | 18100 | 54523;54524;54525 | chr2:178564639;178564638;178564637 | chr2:179429366;179429365;179429364 |
Novex-1 | 18225 | 54898;54899;54900 | chr2:178564639;178564638;178564637 | chr2:179429366;179429365;179429364 |
Novex-2 | 18292 | 55099;55100;55101 | chr2:178564639;178564638;178564637 | chr2:179429366;179429365;179429364 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1413349026 | None | 0.006 | N | 0.343 | 0.061 | 0.430239905395 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/S | rs1413349026 | None | 0.006 | N | 0.343 | 0.061 | 0.430239905395 | gnomAD-4.0.0 | 6.57393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47046E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.4 | ambiguous | 0.3699 | ambiguous | -2.461 | Highly Destabilizing | None | N | 0.287 | neutral | None | None | None | None | N |
F/C | 0.144 | likely_benign | 0.1306 | benign | -1.419 | Destabilizing | 0.371 | N | 0.487 | neutral | N | 0.516206501 | None | None | N |
F/D | 0.8076 | likely_pathogenic | 0.7685 | pathogenic | -2.332 | Highly Destabilizing | 0.068 | N | 0.535 | neutral | None | None | None | None | N |
F/E | 0.8029 | likely_pathogenic | 0.799 | pathogenic | -2.161 | Highly Destabilizing | 0.068 | N | 0.451 | neutral | None | None | None | None | N |
F/G | 0.7233 | likely_pathogenic | 0.6655 | pathogenic | -2.868 | Highly Destabilizing | 0.015 | N | 0.346 | neutral | None | None | None | None | N |
F/H | 0.3685 | ambiguous | 0.355 | ambiguous | -1.196 | Destabilizing | 0.112 | N | 0.392 | neutral | None | None | None | None | N |
F/I | 0.1542 | likely_benign | 0.1478 | benign | -1.164 | Destabilizing | 0.006 | N | 0.321 | neutral | N | 0.44569041 | None | None | N |
F/K | 0.7503 | likely_pathogenic | 0.767 | pathogenic | -1.731 | Destabilizing | 0.035 | N | 0.449 | neutral | None | None | None | None | N |
F/L | 0.7412 | likely_pathogenic | 0.7056 | pathogenic | -1.164 | Destabilizing | 0.002 | N | 0.29 | neutral | N | 0.477474754 | None | None | N |
F/M | 0.4156 | ambiguous | 0.3938 | ambiguous | -0.809 | Destabilizing | 0.204 | N | 0.389 | neutral | None | None | None | None | N |
F/N | 0.5778 | likely_pathogenic | 0.5342 | ambiguous | -2.088 | Highly Destabilizing | 0.068 | N | 0.535 | neutral | None | None | None | None | N |
F/P | 0.9699 | likely_pathogenic | 0.9593 | pathogenic | -1.601 | Destabilizing | 0.068 | N | 0.561 | neutral | None | None | None | None | N |
F/Q | 0.6204 | likely_pathogenic | 0.6286 | pathogenic | -2.079 | Highly Destabilizing | 0.068 | N | 0.594 | neutral | None | None | None | None | N |
F/R | 0.6039 | likely_pathogenic | 0.6108 | pathogenic | -1.194 | Destabilizing | 0.035 | N | 0.571 | neutral | None | None | None | None | N |
F/S | 0.3165 | likely_benign | 0.2789 | benign | -2.779 | Highly Destabilizing | 0.006 | N | 0.343 | neutral | N | 0.515339709 | None | None | N |
F/T | 0.3219 | likely_benign | 0.3026 | benign | -2.5 | Highly Destabilizing | None | N | 0.257 | neutral | None | None | None | None | N |
F/V | 0.1335 | likely_benign | 0.1333 | benign | -1.601 | Destabilizing | None | N | 0.19 | neutral | N | 0.390759847 | None | None | N |
F/W | 0.3979 | ambiguous | 0.3419 | ambiguous | -0.283 | Destabilizing | 0.204 | N | 0.431 | neutral | None | None | None | None | N |
F/Y | 0.0907 | likely_benign | 0.0843 | benign | -0.596 | Destabilizing | None | N | 0.108 | neutral | N | 0.41890924 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.