Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2718 | 8377;8378;8379 | chr2:178770640;178770639;178770638 | chr2:179635367;179635366;179635365 |
N2AB | 2718 | 8377;8378;8379 | chr2:178770640;178770639;178770638 | chr2:179635367;179635366;179635365 |
N2A | 2718 | 8377;8378;8379 | chr2:178770640;178770639;178770638 | chr2:179635367;179635366;179635365 |
N2B | 2672 | 8239;8240;8241 | chr2:178770640;178770639;178770638 | chr2:179635367;179635366;179635365 |
Novex-1 | 2672 | 8239;8240;8241 | chr2:178770640;178770639;178770638 | chr2:179635367;179635366;179635365 |
Novex-2 | 2672 | 8239;8240;8241 | chr2:178770640;178770639;178770638 | chr2:179635367;179635366;179635365 |
Novex-3 | 2718 | 8377;8378;8379 | chr2:178770640;178770639;178770638 | chr2:179635367;179635366;179635365 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2091324546 | None | 0.999 | D | 0.481 | 0.667 | 0.746317035393 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5541 | ambiguous | 0.6973 | pathogenic | -0.501 | Destabilizing | 0.999 | D | 0.481 | neutral | D | 0.54989227 | None | None | I |
V/C | 0.9481 | likely_pathogenic | 0.9631 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
V/D | 0.9868 | likely_pathogenic | 0.9927 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
V/E | 0.9493 | likely_pathogenic | 0.9618 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.652 | neutral | D | 0.703029302 | None | None | I |
V/F | 0.8528 | likely_pathogenic | 0.8979 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
V/G | 0.8223 | likely_pathogenic | 0.9056 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | D | 0.702944807 | None | None | I |
V/H | 0.9906 | likely_pathogenic | 0.9935 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/I | 0.1356 | likely_benign | 0.1589 | benign | -0.338 | Destabilizing | 0.998 | D | 0.515 | neutral | None | None | None | None | I |
V/K | 0.9557 | likely_pathogenic | 0.9593 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
V/L | 0.7328 | likely_pathogenic | 0.7955 | pathogenic | -0.338 | Destabilizing | 0.997 | D | 0.517 | neutral | D | 0.607329521 | None | None | I |
V/M | 0.5489 | ambiguous | 0.6408 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.701958867 | None | None | I |
V/N | 0.9605 | likely_pathogenic | 0.9774 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
V/P | 0.9968 | likely_pathogenic | 0.9978 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
V/Q | 0.9382 | likely_pathogenic | 0.9515 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/R | 0.9433 | likely_pathogenic | 0.9478 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
V/S | 0.82 | likely_pathogenic | 0.9013 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
V/T | 0.6036 | likely_pathogenic | 0.7102 | pathogenic | -0.437 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | I |
V/W | 0.9983 | likely_pathogenic | 0.9989 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
V/Y | 0.9877 | likely_pathogenic | 0.9919 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.