Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2719 | 8380;8381;8382 | chr2:178770637;178770636;178770635 | chr2:179635364;179635363;179635362 |
N2AB | 2719 | 8380;8381;8382 | chr2:178770637;178770636;178770635 | chr2:179635364;179635363;179635362 |
N2A | 2719 | 8380;8381;8382 | chr2:178770637;178770636;178770635 | chr2:179635364;179635363;179635362 |
N2B | 2673 | 8242;8243;8244 | chr2:178770637;178770636;178770635 | chr2:179635364;179635363;179635362 |
Novex-1 | 2673 | 8242;8243;8244 | chr2:178770637;178770636;178770635 | chr2:179635364;179635363;179635362 |
Novex-2 | 2673 | 8242;8243;8244 | chr2:178770637;178770636;178770635 | chr2:179635364;179635363;179635362 |
Novex-3 | 2719 | 8380;8381;8382 | chr2:178770637;178770636;178770635 | chr2:179635364;179635363;179635362 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2091324218 | None | 0.998 | D | 0.559 | 0.262 | 0.308904156042 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92382E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs2091324218 | None | 0.998 | D | 0.559 | 0.262 | 0.308904156042 | gnomAD-4.0.0 | 2.56179E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.42436E-05 | None | 0 | 0 | 2.39175E-06 | 0 | 0 |
T/S | None | None | 0.999 | D | 0.581 | 0.266 | 0.27479166964 | gnomAD-4.0.0 | 1.59114E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85656E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1396 | likely_benign | 0.1783 | benign | -0.268 | Destabilizing | 0.998 | D | 0.559 | neutral | D | 0.530411215 | None | None | I |
T/C | 0.6857 | likely_pathogenic | 0.749 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | I |
T/D | 0.8152 | likely_pathogenic | 0.8447 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
T/E | 0.625 | likely_pathogenic | 0.6677 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | I |
T/F | 0.6324 | likely_pathogenic | 0.6864 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
T/G | 0.5458 | ambiguous | 0.5959 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
T/H | 0.6789 | likely_pathogenic | 0.7154 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
T/I | 0.3223 | likely_benign | 0.4147 | ambiguous | -0.1 | Destabilizing | 0.884 | D | 0.415 | neutral | D | 0.563749935 | None | None | I |
T/K | 0.4205 | ambiguous | 0.4452 | ambiguous | -0.368 | Destabilizing | 1.0 | D | 0.608 | neutral | N | 0.506390802 | None | None | I |
T/L | 0.1538 | likely_benign | 0.1898 | benign | -0.1 | Destabilizing | 0.994 | D | 0.551 | neutral | None | None | None | None | I |
T/M | 0.1127 | likely_benign | 0.1291 | benign | 0.058 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
T/N | 0.354 | ambiguous | 0.4245 | ambiguous | -0.085 | Destabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | I |
T/P | 0.2438 | likely_benign | 0.2793 | benign | -0.129 | Destabilizing | 1.0 | D | 0.588 | neutral | D | 0.534996171 | None | None | I |
T/Q | 0.4636 | ambiguous | 0.499 | ambiguous | -0.346 | Destabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | I |
T/R | 0.3864 | ambiguous | 0.4002 | ambiguous | -0.048 | Destabilizing | 1.0 | D | 0.589 | neutral | N | 0.500273899 | None | None | I |
T/S | 0.2621 | likely_benign | 0.3071 | benign | -0.267 | Destabilizing | 0.999 | D | 0.581 | neutral | D | 0.553918992 | None | None | I |
T/V | 0.232 | likely_benign | 0.2866 | benign | -0.129 | Destabilizing | 0.985 | D | 0.566 | neutral | None | None | None | None | I |
T/W | 0.8887 | likely_pathogenic | 0.8958 | pathogenic | -0.825 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
T/Y | 0.7226 | likely_pathogenic | 0.7673 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.