Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27195 | 81808;81809;81810 | chr2:178564549;178564548;178564547 | chr2:179429276;179429275;179429274 |
N2AB | 25554 | 76885;76886;76887 | chr2:178564549;178564548;178564547 | chr2:179429276;179429275;179429274 |
N2A | 24627 | 74104;74105;74106 | chr2:178564549;178564548;178564547 | chr2:179429276;179429275;179429274 |
N2B | 18130 | 54613;54614;54615 | chr2:178564549;178564548;178564547 | chr2:179429276;179429275;179429274 |
Novex-1 | 18255 | 54988;54989;54990 | chr2:178564549;178564548;178564547 | chr2:179429276;179429275;179429274 |
Novex-2 | 18322 | 55189;55190;55191 | chr2:178564549;178564548;178564547 | chr2:179429276;179429275;179429274 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | None | N | 0.187 | 0.116 | 0.176091768786 | gnomAD-4.0.0 | 1.59254E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78427E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4024 | ambiguous | 0.3853 | ambiguous | -0.657 | Destabilizing | 0.824 | D | 0.324 | neutral | None | None | None | None | I |
A/D | 0.177 | likely_benign | 0.1599 | benign | -0.918 | Destabilizing | 0.062 | N | 0.356 | neutral | N | 0.417778664 | None | None | I |
A/E | 0.1196 | likely_benign | 0.1124 | benign | -1.07 | Destabilizing | None | N | 0.161 | neutral | None | None | None | None | I |
A/F | 0.2495 | likely_benign | 0.2122 | benign | -0.996 | Destabilizing | 0.38 | N | 0.415 | neutral | None | None | None | None | I |
A/G | 0.1426 | likely_benign | 0.1317 | benign | -0.454 | Destabilizing | 0.117 | N | 0.235 | neutral | N | 0.413604995 | None | None | I |
A/H | 0.35 | ambiguous | 0.335 | benign | -0.523 | Destabilizing | 0.555 | D | 0.395 | neutral | None | None | None | None | I |
A/I | 0.1186 | likely_benign | 0.1038 | benign | -0.422 | Destabilizing | 0.029 | N | 0.324 | neutral | None | None | None | None | I |
A/K | 0.2779 | likely_benign | 0.2522 | benign | -0.872 | Destabilizing | 0.081 | N | 0.276 | neutral | None | None | None | None | I |
A/L | 0.1042 | likely_benign | 0.0932 | benign | -0.422 | Destabilizing | 0.081 | N | 0.273 | neutral | None | None | None | None | I |
A/M | 0.1504 | likely_benign | 0.1336 | benign | -0.427 | Destabilizing | 0.38 | N | 0.307 | neutral | None | None | None | None | I |
A/N | 0.1534 | likely_benign | 0.1402 | benign | -0.443 | Destabilizing | 0.38 | N | 0.403 | neutral | None | None | None | None | I |
A/P | 0.2009 | likely_benign | 0.1836 | benign | -0.379 | Destabilizing | 0.484 | N | 0.329 | neutral | N | 0.437807219 | None | None | I |
A/Q | 0.1867 | likely_benign | 0.185 | benign | -0.758 | Destabilizing | 0.007 | N | 0.213 | neutral | None | None | None | None | I |
A/R | 0.2787 | likely_benign | 0.2544 | benign | -0.324 | Destabilizing | 0.149 | N | 0.344 | neutral | None | None | None | None | I |
A/S | 0.0846 | likely_benign | 0.0831 | benign | -0.568 | Destabilizing | 0.052 | N | 0.265 | neutral | N | 0.433228119 | None | None | I |
A/T | 0.0703 | likely_benign | 0.0694 | benign | -0.655 | Destabilizing | 0.062 | N | 0.256 | neutral | N | 0.415277076 | None | None | I |
A/V | 0.0798 | likely_benign | 0.0719 | benign | -0.379 | Destabilizing | None | N | 0.187 | neutral | N | 0.428246373 | None | None | I |
A/W | 0.6386 | likely_pathogenic | 0.5931 | pathogenic | -1.151 | Destabilizing | 0.935 | D | 0.514 | neutral | None | None | None | None | I |
A/Y | 0.3635 | ambiguous | 0.3335 | benign | -0.822 | Destabilizing | 0.555 | D | 0.419 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.