Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27196 | 81811;81812;81813 | chr2:178564546;178564545;178564544 | chr2:179429273;179429272;179429271 |
N2AB | 25555 | 76888;76889;76890 | chr2:178564546;178564545;178564544 | chr2:179429273;179429272;179429271 |
N2A | 24628 | 74107;74108;74109 | chr2:178564546;178564545;178564544 | chr2:179429273;179429272;179429271 |
N2B | 18131 | 54616;54617;54618 | chr2:178564546;178564545;178564544 | chr2:179429273;179429272;179429271 |
Novex-1 | 18256 | 54991;54992;54993 | chr2:178564546;178564545;178564544 | chr2:179429273;179429272;179429271 |
Novex-2 | 18323 | 55192;55193;55194 | chr2:178564546;178564545;178564544 | chr2:179429273;179429272;179429271 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | rs1704959686 | None | 0.994 | N | 0.636 | 0.377 | 0.435590266561 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 1.30976E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/S | rs1704959686 | None | 0.994 | N | 0.636 | 0.377 | 0.435590266561 | gnomAD-4.0.0 | 1.31437E-05 | None | None | None | None | I | None | 0 | 1.30976E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7572 | likely_pathogenic | 0.7209 | pathogenic | -0.726 | Destabilizing | 0.968 | D | 0.513 | neutral | None | None | None | None | I |
Y/C | 0.268 | likely_benign | 0.2274 | benign | 0.281 | Stabilizing | 0.999 | D | 0.678 | prob.neutral | N | 0.49864639 | None | None | I |
Y/D | 0.6293 | likely_pathogenic | 0.5737 | pathogenic | 0.857 | Stabilizing | 0.998 | D | 0.684 | prob.neutral | N | 0.475125096 | None | None | I |
Y/E | 0.8897 | likely_pathogenic | 0.8635 | pathogenic | 0.823 | Stabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | I |
Y/F | 0.1114 | likely_benign | 0.1224 | benign | -0.494 | Destabilizing | 0.067 | N | 0.293 | neutral | N | 0.473762445 | None | None | I |
Y/G | 0.6012 | likely_pathogenic | 0.5817 | pathogenic | -0.912 | Destabilizing | 0.995 | D | 0.661 | neutral | None | None | None | None | I |
Y/H | 0.3783 | ambiguous | 0.3305 | benign | 0.136 | Stabilizing | 0.998 | D | 0.669 | neutral | N | 0.501410407 | None | None | I |
Y/I | 0.8116 | likely_pathogenic | 0.7875 | pathogenic | -0.266 | Destabilizing | 0.982 | D | 0.576 | neutral | None | None | None | None | I |
Y/K | 0.8577 | likely_pathogenic | 0.8289 | pathogenic | 0.338 | Stabilizing | 0.995 | D | 0.637 | neutral | None | None | None | None | I |
Y/L | 0.7383 | likely_pathogenic | 0.6891 | pathogenic | -0.266 | Destabilizing | 0.938 | D | 0.573 | neutral | None | None | None | None | I |
Y/M | 0.8045 | likely_pathogenic | 0.7848 | pathogenic | 0.051 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
Y/N | 0.2552 | likely_benign | 0.2253 | benign | 0.259 | Stabilizing | 0.998 | D | 0.663 | neutral | N | 0.479898984 | None | None | I |
Y/P | 0.9876 | likely_pathogenic | 0.9845 | pathogenic | -0.399 | Destabilizing | 0.998 | D | 0.684 | prob.neutral | None | None | None | None | I |
Y/Q | 0.806 | likely_pathogenic | 0.7742 | pathogenic | 0.219 | Stabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | I |
Y/R | 0.6959 | likely_pathogenic | 0.6514 | pathogenic | 0.67 | Stabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | I |
Y/S | 0.3687 | ambiguous | 0.3179 | benign | -0.198 | Destabilizing | 0.994 | D | 0.636 | neutral | N | 0.496599233 | None | None | I |
Y/T | 0.7058 | likely_pathogenic | 0.665 | pathogenic | -0.14 | Destabilizing | 0.995 | D | 0.645 | neutral | None | None | None | None | I |
Y/V | 0.6784 | likely_pathogenic | 0.6481 | pathogenic | -0.399 | Destabilizing | 0.968 | D | 0.567 | neutral | None | None | None | None | I |
Y/W | 0.4993 | ambiguous | 0.4765 | ambiguous | -0.611 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.