Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27214 | 81865;81866;81867 | chr2:178564492;178564491;178564490 | chr2:179429219;179429218;179429217 |
N2AB | 25573 | 76942;76943;76944 | chr2:178564492;178564491;178564490 | chr2:179429219;179429218;179429217 |
N2A | 24646 | 74161;74162;74163 | chr2:178564492;178564491;178564490 | chr2:179429219;179429218;179429217 |
N2B | 18149 | 54670;54671;54672 | chr2:178564492;178564491;178564490 | chr2:179429219;179429218;179429217 |
Novex-1 | 18274 | 55045;55046;55047 | chr2:178564492;178564491;178564490 | chr2:179429219;179429218;179429217 |
Novex-2 | 18341 | 55246;55247;55248 | chr2:178564492;178564491;178564490 | chr2:179429219;179429218;179429217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs1704936651 | None | 0.865 | N | 0.537 | 0.347 | 0.410337123052 | gnomAD-4.0.0 | 3.42485E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.50043E-06 | 0 | 0 |
D/N | None | None | 0.978 | N | 0.591 | 0.351 | 0.360961692134 | gnomAD-4.0.0 | 6.85014E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5328E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1341 | likely_benign | 0.1191 | benign | 0.055 | Stabilizing | 0.865 | D | 0.537 | neutral | N | 0.46695669 | None | None | N |
D/C | 0.5411 | ambiguous | 0.4875 | ambiguous | -0.124 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
D/E | 0.0965 | likely_benign | 0.0865 | benign | -0.328 | Destabilizing | 0.039 | N | 0.314 | neutral | N | 0.434420197 | None | None | N |
D/F | 0.5349 | ambiguous | 0.4772 | ambiguous | -0.073 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
D/G | 0.1353 | likely_benign | 0.1196 | benign | -0.049 | Destabilizing | 0.928 | D | 0.548 | neutral | N | 0.448888218 | None | None | N |
D/H | 0.2628 | likely_benign | 0.2214 | benign | 0.525 | Stabilizing | 0.997 | D | 0.696 | prob.neutral | N | 0.470661223 | None | None | N |
D/I | 0.3382 | likely_benign | 0.2997 | benign | 0.258 | Stabilizing | 0.992 | D | 0.773 | deleterious | None | None | None | None | N |
D/K | 0.3041 | likely_benign | 0.2536 | benign | 0.433 | Stabilizing | 0.968 | D | 0.609 | neutral | None | None | None | None | N |
D/L | 0.3254 | likely_benign | 0.2861 | benign | 0.258 | Stabilizing | 0.983 | D | 0.744 | deleterious | None | None | None | None | N |
D/M | 0.5089 | ambiguous | 0.4552 | ambiguous | 0.05 | Stabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
D/N | 0.0866 | likely_benign | 0.0802 | benign | 0.233 | Stabilizing | 0.978 | D | 0.591 | neutral | N | 0.466783332 | None | None | N |
D/P | 0.7018 | likely_pathogenic | 0.658 | pathogenic | 0.209 | Stabilizing | 0.992 | D | 0.643 | neutral | None | None | None | None | N |
D/Q | 0.2484 | likely_benign | 0.2142 | benign | 0.223 | Stabilizing | 0.968 | D | 0.649 | neutral | None | None | None | None | N |
D/R | 0.3849 | ambiguous | 0.3156 | benign | 0.647 | Stabilizing | 0.983 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/S | 0.1041 | likely_benign | 0.0924 | benign | 0.135 | Stabilizing | 0.895 | D | 0.475 | neutral | None | None | None | None | N |
D/T | 0.1947 | likely_benign | 0.171 | benign | 0.22 | Stabilizing | 0.983 | D | 0.633 | neutral | None | None | None | None | N |
D/V | 0.1984 | likely_benign | 0.1783 | benign | 0.209 | Stabilizing | 0.978 | D | 0.729 | prob.delet. | N | 0.470105018 | None | None | N |
D/W | 0.8521 | likely_pathogenic | 0.8175 | pathogenic | -0.05 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
D/Y | 0.2363 | likely_benign | 0.2118 | benign | 0.149 | Stabilizing | 0.999 | D | 0.776 | deleterious | N | 0.488551668 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.