Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27233 | 81922;81923;81924 | chr2:178564435;178564434;178564433 | chr2:179429162;179429161;179429160 |
N2AB | 25592 | 76999;77000;77001 | chr2:178564435;178564434;178564433 | chr2:179429162;179429161;179429160 |
N2A | 24665 | 74218;74219;74220 | chr2:178564435;178564434;178564433 | chr2:179429162;179429161;179429160 |
N2B | 18168 | 54727;54728;54729 | chr2:178564435;178564434;178564433 | chr2:179429162;179429161;179429160 |
Novex-1 | 18293 | 55102;55103;55104 | chr2:178564435;178564434;178564433 | chr2:179429162;179429161;179429160 |
Novex-2 | 18360 | 55303;55304;55305 | chr2:178564435;178564434;178564433 | chr2:179429162;179429161;179429160 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.117 | N | 0.418 | 0.101 | 0.18274738541 | gnomAD-4.0.0 | 1.59359E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41196E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0947 | likely_benign | 0.0883 | benign | -0.511 | Destabilizing | 0.001 | N | 0.177 | neutral | None | None | None | None | N |
S/C | 0.1683 | likely_benign | 0.1576 | benign | -0.338 | Destabilizing | 0.78 | D | 0.541 | neutral | N | 0.485032949 | None | None | N |
S/D | 0.588 | likely_pathogenic | 0.5092 | ambiguous | 0.094 | Stabilizing | 0.149 | N | 0.383 | neutral | None | None | None | None | N |
S/E | 0.6989 | likely_pathogenic | 0.6491 | pathogenic | 0.018 | Stabilizing | 0.149 | N | 0.369 | neutral | None | None | None | None | N |
S/F | 0.3475 | ambiguous | 0.2828 | benign | -0.995 | Destabilizing | 0.555 | D | 0.625 | neutral | None | None | None | None | N |
S/G | 0.1114 | likely_benign | 0.1052 | benign | -0.658 | Destabilizing | 0.052 | N | 0.391 | neutral | N | 0.501397338 | None | None | N |
S/H | 0.5291 | ambiguous | 0.4756 | ambiguous | -1.118 | Destabilizing | 0.935 | D | 0.541 | neutral | None | None | None | None | N |
S/I | 0.2937 | likely_benign | 0.2462 | benign | -0.247 | Destabilizing | 0.188 | N | 0.602 | neutral | N | 0.507843308 | None | None | N |
S/K | 0.8174 | likely_pathogenic | 0.7562 | pathogenic | -0.585 | Destabilizing | 0.149 | N | 0.361 | neutral | None | None | None | None | N |
S/L | 0.1205 | likely_benign | 0.1034 | benign | -0.247 | Destabilizing | 0.081 | N | 0.515 | neutral | None | None | None | None | N |
S/M | 0.2123 | likely_benign | 0.1818 | benign | 0.006 | Stabilizing | 0.555 | D | 0.549 | neutral | None | None | None | None | N |
S/N | 0.1899 | likely_benign | 0.1588 | benign | -0.323 | Destabilizing | 0.117 | N | 0.418 | neutral | N | 0.492911141 | None | None | N |
S/P | 0.2323 | likely_benign | 0.1993 | benign | -0.305 | Destabilizing | 0.555 | D | 0.553 | neutral | None | None | None | None | N |
S/Q | 0.6584 | likely_pathogenic | 0.6111 | pathogenic | -0.557 | Destabilizing | 0.555 | D | 0.465 | neutral | None | None | None | None | N |
S/R | 0.8019 | likely_pathogenic | 0.7381 | pathogenic | -0.362 | Destabilizing | 0.317 | N | 0.565 | neutral | N | 0.487697322 | None | None | N |
S/T | 0.0652 | likely_benign | 0.0588 | benign | -0.427 | Destabilizing | None | N | 0.174 | neutral | N | 0.367733845 | None | None | N |
S/V | 0.2685 | likely_benign | 0.2281 | benign | -0.305 | Destabilizing | 0.081 | N | 0.51 | neutral | None | None | None | None | N |
S/W | 0.5522 | ambiguous | 0.4875 | ambiguous | -0.976 | Destabilizing | 0.935 | D | 0.635 | neutral | None | None | None | None | N |
S/Y | 0.3433 | ambiguous | 0.2841 | benign | -0.713 | Destabilizing | 0.555 | D | 0.621 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.