Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27241 | 81946;81947;81948 | chr2:178564411;178564410;178564409 | chr2:179429138;179429137;179429136 |
N2AB | 25600 | 77023;77024;77025 | chr2:178564411;178564410;178564409 | chr2:179429138;179429137;179429136 |
N2A | 24673 | 74242;74243;74244 | chr2:178564411;178564410;178564409 | chr2:179429138;179429137;179429136 |
N2B | 18176 | 54751;54752;54753 | chr2:178564411;178564410;178564409 | chr2:179429138;179429137;179429136 |
Novex-1 | 18301 | 55126;55127;55128 | chr2:178564411;178564410;178564409 | chr2:179429138;179429137;179429136 |
Novex-2 | 18368 | 55327;55328;55329 | chr2:178564411;178564410;178564409 | chr2:179429138;179429137;179429136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs773476805 | -2.588 | 1.0 | D | 0.846 | 0.826 | 0.765320684573 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs773476805 | -2.588 | 1.0 | D | 0.846 | 0.826 | 0.765320684573 | gnomAD-4.0.0 | 3.18443E-06 | None | None | None | None | N | None | 0 | 4.57875E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9937 | likely_pathogenic | 0.9909 | pathogenic | -3.292 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/C | 0.882 | likely_pathogenic | 0.816 | pathogenic | -1.687 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.656684369 | None | None | N |
Y/D | 0.9951 | likely_pathogenic | 0.9924 | pathogenic | -3.734 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.694062878 | None | None | N |
Y/E | 0.998 | likely_pathogenic | 0.9971 | pathogenic | -3.517 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
Y/F | 0.3202 | likely_benign | 0.2915 | benign | -1.3 | Destabilizing | 0.999 | D | 0.757 | deleterious | D | 0.634669806 | None | None | N |
Y/G | 0.9812 | likely_pathogenic | 0.9764 | pathogenic | -3.698 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/H | 0.96 | likely_pathogenic | 0.9487 | pathogenic | -2.455 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.678043517 | None | None | N |
Y/I | 0.9701 | likely_pathogenic | 0.9588 | pathogenic | -1.92 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
Y/K | 0.9977 | likely_pathogenic | 0.9966 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/L | 0.9517 | likely_pathogenic | 0.942 | pathogenic | -1.92 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
Y/M | 0.9784 | likely_pathogenic | 0.9722 | pathogenic | -1.589 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/N | 0.9602 | likely_pathogenic | 0.9449 | pathogenic | -3.162 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | D | 0.693861074 | None | None | N |
Y/P | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -2.396 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
Y/Q | 0.9963 | likely_pathogenic | 0.9947 | pathogenic | -2.889 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/R | 0.9924 | likely_pathogenic | 0.9897 | pathogenic | -2.146 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/S | 0.9769 | likely_pathogenic | 0.967 | pathogenic | -3.434 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.694062878 | None | None | N |
Y/T | 0.9915 | likely_pathogenic | 0.9873 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
Y/V | 0.9358 | likely_pathogenic | 0.9154 | pathogenic | -2.396 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/W | 0.8171 | likely_pathogenic | 0.7971 | pathogenic | -0.59 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.