Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27242 | 81949;81950;81951 | chr2:178564408;178564407;178564406 | chr2:179429135;179429134;179429133 |
N2AB | 25601 | 77026;77027;77028 | chr2:178564408;178564407;178564406 | chr2:179429135;179429134;179429133 |
N2A | 24674 | 74245;74246;74247 | chr2:178564408;178564407;178564406 | chr2:179429135;179429134;179429133 |
N2B | 18177 | 54754;54755;54756 | chr2:178564408;178564407;178564406 | chr2:179429135;179429134;179429133 |
Novex-1 | 18302 | 55129;55130;55131 | chr2:178564408;178564407;178564406 | chr2:179429135;179429134;179429133 |
Novex-2 | 18369 | 55330;55331;55332 | chr2:178564408;178564407;178564406 | chr2:179429135;179429134;179429133 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.759 | 0.522 | 0.566919426312 | gnomAD-4.0.0 | 1.36873E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79906E-06 | 0 | 0 |
E/V | rs1210575101 | 1.259 | 1.0 | N | 0.777 | 0.53 | 0.487843537783 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/V | rs1210575101 | 1.259 | 1.0 | N | 0.777 | 0.53 | 0.487843537783 | gnomAD-4.0.0 | 6.84363E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15947E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6303 | likely_pathogenic | 0.5479 | ambiguous | -0.642 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.488551668 | None | None | N |
E/C | 0.9599 | likely_pathogenic | 0.9547 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
E/D | 0.5971 | likely_pathogenic | 0.6303 | pathogenic | -1.144 | Destabilizing | 0.999 | D | 0.585 | neutral | N | 0.469068288 | None | None | N |
E/F | 0.9819 | likely_pathogenic | 0.9754 | pathogenic | -0.098 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
E/G | 0.8623 | likely_pathogenic | 0.8109 | pathogenic | -1.109 | Destabilizing | 1.0 | D | 0.759 | deleterious | N | 0.516063672 | None | None | N |
E/H | 0.9418 | likely_pathogenic | 0.9254 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/I | 0.8456 | likely_pathogenic | 0.8162 | pathogenic | 0.685 | Stabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
E/K | 0.8444 | likely_pathogenic | 0.7752 | pathogenic | -0.329 | Destabilizing | 0.999 | D | 0.657 | neutral | D | 0.522521971 | None | None | N |
E/L | 0.9173 | likely_pathogenic | 0.8982 | pathogenic | 0.685 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
E/M | 0.8777 | likely_pathogenic | 0.8441 | pathogenic | 1.341 | Stabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/N | 0.8577 | likely_pathogenic | 0.8389 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/P | 0.9987 | likely_pathogenic | 0.9984 | pathogenic | 0.262 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/Q | 0.4322 | ambiguous | 0.3554 | ambiguous | -0.526 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.469900995 | None | None | N |
E/R | 0.8884 | likely_pathogenic | 0.8476 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/S | 0.6972 | likely_pathogenic | 0.6383 | pathogenic | -1.467 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/T | 0.8007 | likely_pathogenic | 0.7578 | pathogenic | -1.016 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/V | 0.7057 | likely_pathogenic | 0.661 | pathogenic | 0.262 | Stabilizing | 1.0 | D | 0.777 | deleterious | N | 0.475687652 | None | None | N |
E/W | 0.9951 | likely_pathogenic | 0.9944 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
E/Y | 0.9665 | likely_pathogenic | 0.9593 | pathogenic | 0.205 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.