Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27250 | 81973;81974;81975 | chr2:178564384;178564383;178564382 | chr2:179429111;179429110;179429109 |
N2AB | 25609 | 77050;77051;77052 | chr2:178564384;178564383;178564382 | chr2:179429111;179429110;179429109 |
N2A | 24682 | 74269;74270;74271 | chr2:178564384;178564383;178564382 | chr2:179429111;179429110;179429109 |
N2B | 18185 | 54778;54779;54780 | chr2:178564384;178564383;178564382 | chr2:179429111;179429110;179429109 |
Novex-1 | 18310 | 55153;55154;55155 | chr2:178564384;178564383;178564382 | chr2:179429111;179429110;179429109 |
Novex-2 | 18377 | 55354;55355;55356 | chr2:178564384;178564383;178564382 | chr2:179429111;179429110;179429109 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.707 | 0.313 | 0.382592752248 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.21507E-04 | 0 |
A/V | None | None | 1.0 | N | 0.643 | 0.435 | 0.467923293426 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8739 | likely_pathogenic | 0.8727 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
A/D | 0.9421 | likely_pathogenic | 0.9344 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
A/E | 0.8803 | likely_pathogenic | 0.8712 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.490332195 | None | None | I |
A/F | 0.8416 | likely_pathogenic | 0.8107 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
A/G | 0.4379 | ambiguous | 0.4545 | ambiguous | -0.579 | Destabilizing | 1.0 | D | 0.541 | neutral | N | 0.468487813 | None | None | I |
A/H | 0.9399 | likely_pathogenic | 0.9353 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
A/I | 0.6948 | likely_pathogenic | 0.6657 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
A/K | 0.9621 | likely_pathogenic | 0.9611 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
A/L | 0.5604 | ambiguous | 0.5365 | ambiguous | -0.524 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
A/M | 0.6362 | likely_pathogenic | 0.6055 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
A/N | 0.8407 | likely_pathogenic | 0.8235 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
A/P | 0.9681 | likely_pathogenic | 0.9707 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.48014465 | None | None | I |
A/Q | 0.8552 | likely_pathogenic | 0.8543 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
A/R | 0.9138 | likely_pathogenic | 0.9104 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
A/S | 0.2089 | likely_benign | 0.2154 | benign | -0.548 | Destabilizing | 1.0 | D | 0.557 | neutral | N | 0.510880826 | None | None | I |
A/T | 0.3692 | ambiguous | 0.3488 | ambiguous | -0.636 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.511707545 | None | None | I |
A/V | 0.461 | ambiguous | 0.4278 | ambiguous | -0.488 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.474433431 | None | None | I |
A/W | 0.9818 | likely_pathogenic | 0.9804 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
A/Y | 0.9227 | likely_pathogenic | 0.9134 | pathogenic | -1.003 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.