Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27260 | 82003;82004;82005 | chr2:178564354;178564353;178564352 | chr2:179429081;179429080;179429079 |
N2AB | 25619 | 77080;77081;77082 | chr2:178564354;178564353;178564352 | chr2:179429081;179429080;179429079 |
N2A | 24692 | 74299;74300;74301 | chr2:178564354;178564353;178564352 | chr2:179429081;179429080;179429079 |
N2B | 18195 | 54808;54809;54810 | chr2:178564354;178564353;178564352 | chr2:179429081;179429080;179429079 |
Novex-1 | 18320 | 55183;55184;55185 | chr2:178564354;178564353;178564352 | chr2:179429081;179429080;179429079 |
Novex-2 | 18387 | 55384;55385;55386 | chr2:178564354;178564353;178564352 | chr2:179429081;179429080;179429079 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs752173731 | -0.581 | 0.792 | N | 0.712 | 0.129 | 0.128392430309 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/T | rs752173731 | -0.581 | 0.792 | N | 0.712 | 0.129 | 0.128392430309 | gnomAD-4.0.0 | 3.18286E-06 | None | None | None | None | N | None | 0 | 4.57415E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1343 | likely_benign | 0.1264 | benign | -1.02 | Destabilizing | 0.511 | D | 0.503 | neutral | None | None | None | None | N |
S/C | 0.1593 | likely_benign | 0.1593 | benign | -0.781 | Destabilizing | 0.997 | D | 0.64 | neutral | N | 0.475555386 | None | None | N |
S/D | 0.6965 | likely_pathogenic | 0.6674 | pathogenic | -0.696 | Destabilizing | 0.991 | D | 0.659 | prob.neutral | None | None | None | None | N |
S/E | 0.8307 | likely_pathogenic | 0.8094 | pathogenic | -0.7 | Destabilizing | 0.911 | D | 0.684 | prob.delet. | None | None | None | None | N |
S/F | 0.5869 | likely_pathogenic | 0.5209 | ambiguous | -1.257 | Destabilizing | 0.947 | D | 0.675 | prob.neutral | None | None | None | None | N |
S/G | 0.1459 | likely_benign | 0.1511 | benign | -1.248 | Destabilizing | 0.886 | D | 0.64 | neutral | N | 0.493406151 | None | None | N |
S/H | 0.6629 | likely_pathogenic | 0.6239 | pathogenic | -1.654 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | N |
S/I | 0.2783 | likely_benign | 0.2528 | benign | -0.514 | Destabilizing | 0.657 | D | 0.671 | prob.neutral | N | 0.496041872 | None | None | N |
S/K | 0.9045 | likely_pathogenic | 0.8788 | pathogenic | -0.843 | Destabilizing | 0.911 | D | 0.67 | prob.neutral | None | None | None | None | N |
S/L | 0.2475 | likely_benign | 0.2178 | benign | -0.514 | Destabilizing | 0.717 | D | 0.643 | neutral | None | None | None | None | N |
S/M | 0.4401 | ambiguous | 0.4163 | ambiguous | -0.124 | Destabilizing | 0.993 | D | 0.613 | neutral | None | None | None | None | N |
S/N | 0.268 | likely_benign | 0.2595 | benign | -0.833 | Destabilizing | 0.988 | D | 0.655 | prob.neutral | N | 0.475048407 | None | None | N |
S/P | 0.1884 | likely_benign | 0.1698 | benign | -0.652 | Destabilizing | 0.991 | D | 0.622 | neutral | None | None | None | None | N |
S/Q | 0.8085 | likely_pathogenic | 0.7853 | pathogenic | -1.08 | Destabilizing | 0.991 | D | 0.629 | neutral | None | None | None | None | N |
S/R | 0.8778 | likely_pathogenic | 0.8391 | pathogenic | -0.627 | Destabilizing | 0.964 | D | 0.628 | neutral | N | 0.499229048 | None | None | N |
S/T | 0.1075 | likely_benign | 0.105 | benign | -0.87 | Destabilizing | 0.792 | D | 0.712 | prob.delet. | N | 0.464969604 | None | None | N |
S/V | 0.2768 | likely_benign | 0.2557 | benign | -0.652 | Destabilizing | 0.016 | N | 0.619 | neutral | None | None | None | None | N |
S/W | 0.7942 | likely_pathogenic | 0.7529 | pathogenic | -1.165 | Destabilizing | 0.998 | D | 0.697 | prob.delet. | None | None | None | None | N |
S/Y | 0.5604 | ambiguous | 0.503 | ambiguous | -0.926 | Destabilizing | 0.973 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.