Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27264 | 82015;82016;82017 | chr2:178564342;178564341;178564340 | chr2:179429069;179429068;179429067 |
N2AB | 25623 | 77092;77093;77094 | chr2:178564342;178564341;178564340 | chr2:179429069;179429068;179429067 |
N2A | 24696 | 74311;74312;74313 | chr2:178564342;178564341;178564340 | chr2:179429069;179429068;179429067 |
N2B | 18199 | 54820;54821;54822 | chr2:178564342;178564341;178564340 | chr2:179429069;179429068;179429067 |
Novex-1 | 18324 | 55195;55196;55197 | chr2:178564342;178564341;178564340 | chr2:179429069;179429068;179429067 |
Novex-2 | 18391 | 55396;55397;55398 | chr2:178564342;178564341;178564340 | chr2:179429069;179429068;179429067 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.985 | N | 0.404 | 0.205 | 0.45783149361 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
I/V | rs1704855362 | None | 0.985 | N | 0.355 | 0.183 | 0.537588199982 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
I/V | rs1704855362 | None | 0.985 | N | 0.355 | 0.183 | 0.537588199982 | gnomAD-4.0.0 | 2.56236E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.13824E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9199 | likely_pathogenic | 0.891 | pathogenic | -2.101 | Highly Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
I/C | 0.9358 | likely_pathogenic | 0.9184 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
I/D | 0.997 | likely_pathogenic | 0.9956 | pathogenic | -1.727 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
I/E | 0.9831 | likely_pathogenic | 0.9772 | pathogenic | -1.542 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
I/F | 0.4767 | ambiguous | 0.4431 | ambiguous | -1.172 | Destabilizing | 0.999 | D | 0.766 | deleterious | N | 0.484326156 | None | None | N |
I/G | 0.9918 | likely_pathogenic | 0.9877 | pathogenic | -2.609 | Highly Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
I/H | 0.9738 | likely_pathogenic | 0.9664 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
I/K | 0.9503 | likely_pathogenic | 0.936 | pathogenic | -1.47 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
I/L | 0.3112 | likely_benign | 0.3095 | benign | -0.672 | Destabilizing | 0.985 | D | 0.404 | neutral | N | 0.468412135 | None | None | N |
I/M | 0.2859 | likely_benign | 0.2735 | benign | -0.615 | Destabilizing | 0.999 | D | 0.723 | deleterious | N | 0.502280468 | None | None | N |
I/N | 0.9632 | likely_pathogenic | 0.9498 | pathogenic | -1.682 | Destabilizing | 0.999 | D | 0.857 | deleterious | N | 0.502280468 | None | None | N |
I/P | 0.9965 | likely_pathogenic | 0.9948 | pathogenic | -1.124 | Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
I/Q | 0.9587 | likely_pathogenic | 0.9485 | pathogenic | -1.589 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/R | 0.9321 | likely_pathogenic | 0.9114 | pathogenic | -1.165 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
I/S | 0.9531 | likely_pathogenic | 0.9354 | pathogenic | -2.448 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | N | 0.50101302 | None | None | N |
I/T | 0.8581 | likely_pathogenic | 0.8178 | pathogenic | -2.108 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | N | 0.486107862 | None | None | N |
I/V | 0.0859 | likely_benign | 0.0789 | benign | -1.124 | Destabilizing | 0.985 | D | 0.355 | neutral | N | 0.433531976 | None | None | N |
I/W | 0.976 | likely_pathogenic | 0.9699 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
I/Y | 0.9152 | likely_pathogenic | 0.9 | pathogenic | -1.118 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.