Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27287 | 82084;82085;82086 | chr2:178564273;178564272;178564271 | chr2:179429000;179428999;179428998 |
N2AB | 25646 | 77161;77162;77163 | chr2:178564273;178564272;178564271 | chr2:179429000;179428999;179428998 |
N2A | 24719 | 74380;74381;74382 | chr2:178564273;178564272;178564271 | chr2:179429000;179428999;179428998 |
N2B | 18222 | 54889;54890;54891 | chr2:178564273;178564272;178564271 | chr2:179429000;179428999;179428998 |
Novex-1 | 18347 | 55264;55265;55266 | chr2:178564273;178564272;178564271 | chr2:179429000;179428999;179428998 |
Novex-2 | 18414 | 55465;55466;55467 | chr2:178564273;178564272;178564271 | chr2:179429000;179428999;179428998 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1704823668 | None | 0.997 | N | 0.505 | 0.466 | 0.846003560123 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1704823668 | None | 0.997 | N | 0.505 | 0.466 | 0.846003560123 | gnomAD-4.0.0 | 1.85963E-06 | None | None | None | None | N | None | 4.00502E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4126 | ambiguous | 0.3337 | benign | -1.984 | Destabilizing | 0.999 | D | 0.538 | neutral | N | 0.487066044 | None | None | N |
V/C | 0.7742 | likely_pathogenic | 0.726 | pathogenic | -1.301 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
V/D | 0.924 | likely_pathogenic | 0.9167 | pathogenic | -2.528 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.564401497 | None | None | N |
V/E | 0.8198 | likely_pathogenic | 0.8017 | pathogenic | -2.376 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/F | 0.3248 | likely_benign | 0.2861 | benign | -1.267 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.537307566 | None | None | N |
V/G | 0.5602 | ambiguous | 0.511 | ambiguous | -2.457 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.552538212 | None | None | N |
V/H | 0.8813 | likely_pathogenic | 0.8559 | pathogenic | -2.247 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
V/I | 0.0781 | likely_benign | 0.0785 | benign | -0.694 | Destabilizing | 0.997 | D | 0.505 | neutral | N | 0.503132837 | None | None | N |
V/K | 0.7174 | likely_pathogenic | 0.6926 | pathogenic | -1.798 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
V/L | 0.22 | likely_benign | 0.2137 | benign | -0.694 | Destabilizing | 0.997 | D | 0.546 | neutral | N | 0.516668416 | None | None | N |
V/M | 0.2466 | likely_benign | 0.2199 | benign | -0.505 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
V/N | 0.8041 | likely_pathogenic | 0.778 | pathogenic | -1.889 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/P | 0.9683 | likely_pathogenic | 0.9638 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/Q | 0.7336 | likely_pathogenic | 0.6978 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/R | 0.6517 | likely_pathogenic | 0.6259 | pathogenic | -1.467 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/S | 0.6201 | likely_pathogenic | 0.5577 | ambiguous | -2.434 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
V/T | 0.4099 | ambiguous | 0.3724 | ambiguous | -2.16 | Highly Destabilizing | 0.999 | D | 0.602 | neutral | None | None | None | None | N |
V/W | 0.9395 | likely_pathogenic | 0.9235 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/Y | 0.7954 | likely_pathogenic | 0.7689 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.