Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27288 | 82087;82088;82089 | chr2:178564270;178564269;178564268 | chr2:179428997;179428996;179428995 |
N2AB | 25647 | 77164;77165;77166 | chr2:178564270;178564269;178564268 | chr2:179428997;179428996;179428995 |
N2A | 24720 | 74383;74384;74385 | chr2:178564270;178564269;178564268 | chr2:179428997;179428996;179428995 |
N2B | 18223 | 54892;54893;54894 | chr2:178564270;178564269;178564268 | chr2:179428997;179428996;179428995 |
Novex-1 | 18348 | 55267;55268;55269 | chr2:178564270;178564269;178564268 | chr2:179428997;179428996;179428995 |
Novex-2 | 18415 | 55468;55469;55470 | chr2:178564270;178564269;178564268 | chr2:179428997;179428996;179428995 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | None | N | 0.15 | 0.129 | 0.183819452728 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.244 | likely_benign | 0.2465 | benign | 0.05 | Stabilizing | 0.055 | N | 0.398 | neutral | None | None | None | None | I |
H/C | 0.15 | likely_benign | 0.1482 | benign | 0.512 | Stabilizing | 0.958 | D | 0.467 | neutral | None | None | None | None | I |
H/D | 0.2715 | likely_benign | 0.267 | benign | -0.232 | Destabilizing | 0.042 | N | 0.401 | neutral | N | 0.455654766 | None | None | I |
H/E | 0.3053 | likely_benign | 0.2988 | benign | -0.19 | Destabilizing | 0.055 | N | 0.239 | neutral | None | None | None | None | I |
H/F | 0.31 | likely_benign | 0.3073 | benign | 0.903 | Stabilizing | 0.667 | D | 0.467 | neutral | None | None | None | None | I |
H/G | 0.2737 | likely_benign | 0.2722 | benign | -0.251 | Destabilizing | 0.055 | N | 0.409 | neutral | None | None | None | None | I |
H/I | 0.3588 | ambiguous | 0.355 | ambiguous | 0.834 | Stabilizing | 0.667 | D | 0.503 | neutral | None | None | None | None | I |
H/K | 0.1676 | likely_benign | 0.1564 | benign | -0.054 | Destabilizing | 0.002 | N | 0.223 | neutral | None | None | None | None | I |
H/L | 0.1118 | likely_benign | 0.1086 | benign | 0.834 | Stabilizing | 0.081 | N | 0.441 | neutral | N | 0.441917465 | None | None | I |
H/M | 0.3858 | ambiguous | 0.3937 | ambiguous | 0.576 | Stabilizing | 0.859 | D | 0.488 | neutral | None | None | None | None | I |
H/N | 0.0984 | likely_benign | 0.0968 | benign | -0.138 | Destabilizing | None | N | 0.146 | neutral | N | 0.400628203 | None | None | I |
H/P | 0.1502 | likely_benign | 0.1362 | benign | 0.597 | Stabilizing | 0.301 | N | 0.502 | neutral | N | 0.454462688 | None | None | I |
H/Q | 0.1447 | likely_benign | 0.1399 | benign | 0.008 | Stabilizing | 0.175 | N | 0.297 | neutral | N | 0.418077813 | None | None | I |
H/R | 0.0737 | likely_benign | 0.0697 | benign | -0.643 | Destabilizing | None | N | 0.15 | neutral | N | 0.41105584 | None | None | I |
H/S | 0.2136 | likely_benign | 0.2126 | benign | -0.021 | Destabilizing | 0.005 | N | 0.221 | neutral | None | None | None | None | I |
H/T | 0.2513 | likely_benign | 0.2472 | benign | 0.122 | Stabilizing | 0.055 | N | 0.451 | neutral | None | None | None | None | I |
H/V | 0.2685 | likely_benign | 0.274 | benign | 0.597 | Stabilizing | 0.22 | N | 0.487 | neutral | None | None | None | None | I |
H/W | 0.3606 | ambiguous | 0.348 | ambiguous | 0.967 | Stabilizing | 0.958 | D | 0.485 | neutral | None | None | None | None | I |
H/Y | 0.1059 | likely_benign | 0.105 | benign | 1.162 | Stabilizing | 0.301 | N | 0.379 | neutral | N | 0.492250285 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.