Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27297 | 82114;82115;82116 | chr2:178564243;178564242;178564241 | chr2:179428970;179428969;179428968 |
N2AB | 25656 | 77191;77192;77193 | chr2:178564243;178564242;178564241 | chr2:179428970;179428969;179428968 |
N2A | 24729 | 74410;74411;74412 | chr2:178564243;178564242;178564241 | chr2:179428970;179428969;179428968 |
N2B | 18232 | 54919;54920;54921 | chr2:178564243;178564242;178564241 | chr2:179428970;179428969;179428968 |
Novex-1 | 18357 | 55294;55295;55296 | chr2:178564243;178564242;178564241 | chr2:179428970;179428969;179428968 |
Novex-2 | 18424 | 55495;55496;55497 | chr2:178564243;178564242;178564241 | chr2:179428970;179428969;179428968 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs774451230 | None | 0.984 | N | 0.734 | 0.361 | 0.262662153117 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
A/T | rs774451230 | None | 0.984 | N | 0.734 | 0.361 | 0.262662153117 | gnomAD-4.0.0 | 1.85972E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54283E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7034 | likely_pathogenic | 0.7324 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
A/D | 0.9868 | likely_pathogenic | 0.987 | pathogenic | -1.262 | Destabilizing | 0.998 | D | 0.885 | deleterious | N | 0.502233426 | None | None | N |
A/E | 0.9829 | likely_pathogenic | 0.9823 | pathogenic | -1.261 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
A/F | 0.8988 | likely_pathogenic | 0.8941 | pathogenic | -1.037 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
A/G | 0.2217 | likely_benign | 0.2471 | benign | -1.326 | Destabilizing | 0.992 | D | 0.714 | prob.delet. | N | 0.483875681 | None | None | N |
A/H | 0.9906 | likely_pathogenic | 0.9907 | pathogenic | -1.371 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
A/I | 0.7173 | likely_pathogenic | 0.7238 | pathogenic | -0.356 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
A/K | 0.9937 | likely_pathogenic | 0.993 | pathogenic | -1.327 | Destabilizing | 0.998 | D | 0.838 | deleterious | None | None | None | None | N |
A/L | 0.6418 | likely_pathogenic | 0.6441 | pathogenic | -0.356 | Destabilizing | 0.997 | D | 0.771 | deleterious | None | None | None | None | N |
A/M | 0.6222 | likely_pathogenic | 0.6088 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
A/N | 0.9664 | likely_pathogenic | 0.9681 | pathogenic | -1.121 | Destabilizing | 0.998 | D | 0.887 | deleterious | None | None | None | None | N |
A/P | 0.9913 | likely_pathogenic | 0.9921 | pathogenic | -0.537 | Destabilizing | 0.999 | D | 0.851 | deleterious | N | 0.484129171 | None | None | N |
A/Q | 0.9792 | likely_pathogenic | 0.9783 | pathogenic | -1.233 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
A/R | 0.987 | likely_pathogenic | 0.986 | pathogenic | -0.962 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
A/S | 0.3335 | likely_benign | 0.3532 | ambiguous | -1.524 | Destabilizing | 0.916 | D | 0.439 | neutral | N | 0.478849252 | None | None | N |
A/T | 0.3411 | ambiguous | 0.3572 | ambiguous | -1.41 | Destabilizing | 0.984 | D | 0.734 | prob.delet. | N | 0.455883152 | None | None | N |
A/V | 0.3845 | ambiguous | 0.3872 | ambiguous | -0.537 | Destabilizing | 0.996 | D | 0.778 | deleterious | N | 0.486893953 | None | None | N |
A/W | 0.9914 | likely_pathogenic | 0.9904 | pathogenic | -1.381 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
A/Y | 0.9644 | likely_pathogenic | 0.9623 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.