Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27303 | 82132;82133;82134 | chr2:178564225;178564224;178564223 | chr2:179428952;179428951;179428950 |
N2AB | 25662 | 77209;77210;77211 | chr2:178564225;178564224;178564223 | chr2:179428952;179428951;179428950 |
N2A | 24735 | 74428;74429;74430 | chr2:178564225;178564224;178564223 | chr2:179428952;179428951;179428950 |
N2B | 18238 | 54937;54938;54939 | chr2:178564225;178564224;178564223 | chr2:179428952;179428951;179428950 |
Novex-1 | 18363 | 55312;55313;55314 | chr2:178564225;178564224;178564223 | chr2:179428952;179428951;179428950 |
Novex-2 | 18430 | 55513;55514;55515 | chr2:178564225;178564224;178564223 | chr2:179428952;179428951;179428950 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.772 | 0.747 | 0.75814979803 | gnomAD-4.0.0 | 2.05314E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69841E-06 | 0 | 0 |
P/R | None | None | 1.0 | D | 0.798 | 0.748 | 0.604839314244 | gnomAD-4.0.0 | 6.8438E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99471E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.969 | likely_pathogenic | 0.9665 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.559810049 | None | None | I |
P/C | 0.9976 | likely_pathogenic | 0.9973 | pathogenic | -0.635 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
P/D | 0.9937 | likely_pathogenic | 0.993 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
P/E | 0.9931 | likely_pathogenic | 0.9921 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
P/F | 0.9983 | likely_pathogenic | 0.9979 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
P/G | 0.9889 | likely_pathogenic | 0.9885 | pathogenic | -0.742 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
P/H | 0.991 | likely_pathogenic | 0.989 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.794 | deleterious | D | 0.644049318 | None | None | I |
P/I | 0.9862 | likely_pathogenic | 0.9841 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
P/K | 0.9942 | likely_pathogenic | 0.9932 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/L | 0.9657 | likely_pathogenic | 0.9597 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.772 | deleterious | D | 0.644049318 | None | None | I |
P/M | 0.9907 | likely_pathogenic | 0.9895 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/N | 0.9923 | likely_pathogenic | 0.9919 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
P/Q | 0.9906 | likely_pathogenic | 0.9898 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
P/R | 0.9859 | likely_pathogenic | 0.9844 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.643645709 | None | None | I |
P/S | 0.9921 | likely_pathogenic | 0.9914 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.753 | deleterious | D | 0.577407325 | None | None | I |
P/T | 0.974 | likely_pathogenic | 0.9706 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.75 | deleterious | D | 0.618107598 | None | None | I |
P/V | 0.9736 | likely_pathogenic | 0.9708 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
P/W | 0.9988 | likely_pathogenic | 0.9985 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
P/Y | 0.9961 | likely_pathogenic | 0.9953 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.