Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27305 | 82138;82139;82140 | chr2:178564219;178564218;178564217 | chr2:179428946;179428945;179428944 |
N2AB | 25664 | 77215;77216;77217 | chr2:178564219;178564218;178564217 | chr2:179428946;179428945;179428944 |
N2A | 24737 | 74434;74435;74436 | chr2:178564219;178564218;178564217 | chr2:179428946;179428945;179428944 |
N2B | 18240 | 54943;54944;54945 | chr2:178564219;178564218;178564217 | chr2:179428946;179428945;179428944 |
Novex-1 | 18365 | 55318;55319;55320 | chr2:178564219;178564218;178564217 | chr2:179428946;179428945;179428944 |
Novex-2 | 18432 | 55519;55520;55521 | chr2:178564219;178564218;178564217 | chr2:179428946;179428945;179428944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1704786507 | None | 1.0 | D | 0.839 | 0.623 | 0.595673181824 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs1704786507 | None | 1.0 | D | 0.839 | 0.623 | 0.595673181824 | gnomAD-4.0.0 | 2.03004E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7777 | likely_pathogenic | 0.7224 | pathogenic | -1.583 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.542956334 | None | None | N |
P/C | 0.9767 | likely_pathogenic | 0.9727 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/D | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
P/E | 0.998 | likely_pathogenic | 0.9969 | pathogenic | -1.326 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/F | 0.9985 | likely_pathogenic | 0.998 | pathogenic | -1.327 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
P/G | 0.9886 | likely_pathogenic | 0.985 | pathogenic | -1.906 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
P/H | 0.996 | likely_pathogenic | 0.9944 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.576571177 | None | None | N |
P/I | 0.9809 | likely_pathogenic | 0.9748 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/K | 0.9986 | likely_pathogenic | 0.9978 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/L | 0.9217 | likely_pathogenic | 0.8885 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.553397132 | None | None | N |
P/M | 0.9887 | likely_pathogenic | 0.984 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/N | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -1.025 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/Q | 0.9941 | likely_pathogenic | 0.9917 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
P/R | 0.9928 | likely_pathogenic | 0.9902 | pathogenic | -0.732 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.576064198 | None | None | N |
P/S | 0.9763 | likely_pathogenic | 0.9693 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.575557219 | None | None | N |
P/T | 0.957 | likely_pathogenic | 0.9393 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.575557219 | None | None | N |
P/V | 0.9546 | likely_pathogenic | 0.9419 | pathogenic | -1.021 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
P/W | 0.9993 | likely_pathogenic | 0.9989 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
P/Y | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -1.177 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.