Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27307 | 82144;82145;82146 | chr2:178564213;178564212;178564211 | chr2:179428940;179428939;179428938 |
N2AB | 25666 | 77221;77222;77223 | chr2:178564213;178564212;178564211 | chr2:179428940;179428939;179428938 |
N2A | 24739 | 74440;74441;74442 | chr2:178564213;178564212;178564211 | chr2:179428940;179428939;179428938 |
N2B | 18242 | 54949;54950;54951 | chr2:178564213;178564212;178564211 | chr2:179428940;179428939;179428938 |
Novex-1 | 18367 | 55324;55325;55326 | chr2:178564213;178564212;178564211 | chr2:179428940;179428939;179428938 |
Novex-2 | 18434 | 55525;55526;55527 | chr2:178564213;178564212;178564211 | chr2:179428940;179428939;179428938 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs760826563 | -2.015 | 0.104 | D | 0.665 | 0.427 | 0.619546946635 | gnomAD-4.0.0 | 1.3686E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51953E-05 | None | 0 | 0 | 8.99463E-07 | 0 | 0 |
V/D | None | None | 0.667 | D | 0.868 | 0.652 | 0.869592272605 | gnomAD-4.0.0 | 6.843E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99463E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1523 | likely_benign | 0.1417 | benign | -1.677 | Destabilizing | 0.104 | N | 0.665 | neutral | D | 0.54460069 | None | None | N |
V/C | 0.6072 | likely_pathogenic | 0.6018 | pathogenic | -1.277 | Destabilizing | 0.968 | D | 0.763 | deleterious | None | None | None | None | N |
V/D | 0.7036 | likely_pathogenic | 0.6594 | pathogenic | -1.54 | Destabilizing | 0.667 | D | 0.868 | deleterious | D | 0.597846758 | None | None | N |
V/E | 0.62 | likely_pathogenic | 0.5825 | pathogenic | -1.408 | Destabilizing | 0.726 | D | 0.841 | deleterious | None | None | None | None | N |
V/F | 0.2038 | likely_benign | 0.1998 | benign | -1.04 | Destabilizing | 0.124 | N | 0.789 | deleterious | D | 0.553221142 | None | None | N |
V/G | 0.3415 | ambiguous | 0.3111 | benign | -2.142 | Highly Destabilizing | 0.667 | D | 0.829 | deleterious | D | 0.581595232 | None | None | N |
V/H | 0.7392 | likely_pathogenic | 0.7108 | pathogenic | -1.759 | Destabilizing | 0.832 | D | 0.863 | deleterious | None | None | None | None | N |
V/I | 0.0612 | likely_benign | 0.0635 | benign | -0.44 | Destabilizing | None | N | 0.223 | neutral | N | 0.449987948 | None | None | N |
V/K | 0.6288 | likely_pathogenic | 0.5853 | pathogenic | -1.416 | Destabilizing | 0.567 | D | 0.844 | deleterious | None | None | None | None | N |
V/L | 0.1702 | likely_benign | 0.1831 | benign | -0.44 | Destabilizing | 0.009 | N | 0.501 | neutral | D | 0.537414304 | None | None | N |
V/M | 0.1237 | likely_benign | 0.1259 | benign | -0.436 | Destabilizing | 0.567 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/N | 0.4625 | ambiguous | 0.434 | ambiguous | -1.47 | Destabilizing | 0.726 | D | 0.868 | deleterious | None | None | None | None | N |
V/P | 0.7073 | likely_pathogenic | 0.6743 | pathogenic | -0.819 | Destabilizing | 0.89 | D | 0.853 | deleterious | None | None | None | None | N |
V/Q | 0.6181 | likely_pathogenic | 0.5799 | pathogenic | -1.415 | Destabilizing | 0.726 | D | 0.857 | deleterious | None | None | None | None | N |
V/R | 0.5237 | ambiguous | 0.4872 | ambiguous | -1.155 | Destabilizing | 0.726 | D | 0.866 | deleterious | None | None | None | None | N |
V/S | 0.2593 | likely_benign | 0.2389 | benign | -2.127 | Highly Destabilizing | 0.567 | D | 0.83 | deleterious | None | None | None | None | N |
V/T | 0.1582 | likely_benign | 0.1415 | benign | -1.848 | Destabilizing | 0.272 | N | 0.691 | prob.neutral | None | None | None | None | N |
V/W | 0.825 | likely_pathogenic | 0.8231 | pathogenic | -1.393 | Destabilizing | 0.909 | D | 0.856 | deleterious | None | None | None | None | N |
V/Y | 0.5798 | likely_pathogenic | 0.5888 | pathogenic | -1.023 | Destabilizing | 0.003 | N | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.