Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27319 | 82180;82181;82182 | chr2:178564177;178564176;178564175 | chr2:179428904;179428903;179428902 |
N2AB | 25678 | 77257;77258;77259 | chr2:178564177;178564176;178564175 | chr2:179428904;179428903;179428902 |
N2A | 24751 | 74476;74477;74478 | chr2:178564177;178564176;178564175 | chr2:179428904;179428903;179428902 |
N2B | 18254 | 54985;54986;54987 | chr2:178564177;178564176;178564175 | chr2:179428904;179428903;179428902 |
Novex-1 | 18379 | 55360;55361;55362 | chr2:178564177;178564176;178564175 | chr2:179428904;179428903;179428902 |
Novex-2 | 18446 | 55561;55562;55563 | chr2:178564177;178564176;178564175 | chr2:179428904;179428903;179428902 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1175606376 | 0.101 | 0.193 | N | 0.351 | 0.159 | 0.244539031024 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.068 | likely_benign | 0.072 | benign | -0.14 | Destabilizing | None | N | 0.166 | neutral | N | 0.401624628 | None | None | N |
T/C | 0.3551 | ambiguous | 0.3752 | ambiguous | -0.302 | Destabilizing | 0.944 | D | 0.375 | neutral | None | None | None | None | N |
T/D | 0.2256 | likely_benign | 0.2383 | benign | -0.118 | Destabilizing | 0.818 | D | 0.345 | neutral | None | None | None | None | N |
T/E | 0.1905 | likely_benign | 0.201 | benign | -0.216 | Destabilizing | 0.388 | N | 0.363 | neutral | None | None | None | None | N |
T/F | 0.1837 | likely_benign | 0.2017 | benign | -0.802 | Destabilizing | 0.69 | D | 0.406 | neutral | None | None | None | None | N |
T/G | 0.1508 | likely_benign | 0.1623 | benign | -0.19 | Destabilizing | 0.241 | N | 0.381 | neutral | None | None | None | None | N |
T/H | 0.1832 | likely_benign | 0.1937 | benign | -0.375 | Destabilizing | 0.981 | D | 0.403 | neutral | None | None | None | None | N |
T/I | 0.1344 | likely_benign | 0.1518 | benign | -0.128 | Destabilizing | 0.193 | N | 0.351 | neutral | N | 0.478354615 | None | None | N |
T/K | 0.1356 | likely_benign | 0.1478 | benign | -0.3 | Destabilizing | 0.324 | N | 0.367 | neutral | N | 0.405857011 | None | None | N |
T/L | 0.0927 | likely_benign | 0.1005 | benign | -0.128 | Destabilizing | 0.002 | N | 0.237 | neutral | None | None | None | None | N |
T/M | 0.0793 | likely_benign | 0.0813 | benign | -0.113 | Destabilizing | 0.69 | D | 0.377 | neutral | None | None | None | None | N |
T/N | 0.0815 | likely_benign | 0.0854 | benign | -0.036 | Destabilizing | 0.818 | D | 0.414 | neutral | None | None | None | None | N |
T/P | 0.0933 | likely_benign | 0.1022 | benign | -0.109 | Destabilizing | 0.773 | D | 0.353 | neutral | N | 0.466790827 | None | None | N |
T/Q | 0.1732 | likely_benign | 0.1818 | benign | -0.273 | Destabilizing | 0.818 | D | 0.375 | neutral | None | None | None | None | N |
T/R | 0.1247 | likely_benign | 0.1389 | benign | -0.007 | Destabilizing | 0.627 | D | 0.355 | neutral | N | 0.415708646 | None | None | N |
T/S | 0.0903 | likely_benign | 0.0941 | benign | -0.184 | Destabilizing | 0.09 | N | 0.455 | neutral | N | 0.418916735 | None | None | N |
T/V | 0.1107 | likely_benign | 0.1197 | benign | -0.109 | Destabilizing | 0.116 | N | 0.419 | neutral | None | None | None | None | N |
T/W | 0.4604 | ambiguous | 0.4993 | ambiguous | -0.892 | Destabilizing | 0.981 | D | 0.455 | neutral | None | None | None | None | N |
T/Y | 0.2162 | likely_benign | 0.245 | benign | -0.574 | Destabilizing | 0.932 | D | 0.409 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.