Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27323 | 82192;82193;82194 | chr2:178564165;178564164;178564163 | chr2:179428892;179428891;179428890 |
N2AB | 25682 | 77269;77270;77271 | chr2:178564165;178564164;178564163 | chr2:179428892;179428891;179428890 |
N2A | 24755 | 74488;74489;74490 | chr2:178564165;178564164;178564163 | chr2:179428892;179428891;179428890 |
N2B | 18258 | 54997;54998;54999 | chr2:178564165;178564164;178564163 | chr2:179428892;179428891;179428890 |
Novex-1 | 18383 | 55372;55373;55374 | chr2:178564165;178564164;178564163 | chr2:179428892;179428891;179428890 |
Novex-2 | 18450 | 55573;55574;55575 | chr2:178564165;178564164;178564163 | chr2:179428892;179428891;179428890 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | rs1176526187 | -1.718 | 0.994 | N | 0.691 | 0.485 | 0.724833077695 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
M/T | rs1176526187 | -1.718 | 0.994 | N | 0.691 | 0.485 | 0.724833077695 | gnomAD-4.0.0 | 3.18262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86541E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3817 | ambiguous | 0.4427 | ambiguous | -2.325 | Highly Destabilizing | 0.989 | D | 0.675 | neutral | None | None | None | None | N |
M/C | 0.617 | likely_pathogenic | 0.6536 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
M/D | 0.8969 | likely_pathogenic | 0.9378 | pathogenic | -1.328 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
M/E | 0.5608 | ambiguous | 0.6437 | pathogenic | -1.217 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
M/F | 0.2774 | likely_benign | 0.3248 | benign | -0.976 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
M/G | 0.6307 | likely_pathogenic | 0.7166 | pathogenic | -2.734 | Highly Destabilizing | 0.995 | D | 0.752 | deleterious | None | None | None | None | N |
M/H | 0.5575 | ambiguous | 0.6389 | pathogenic | -1.923 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
M/I | 0.2343 | likely_benign | 0.2825 | benign | -1.201 | Destabilizing | 0.985 | D | 0.639 | neutral | N | 0.407399459 | None | None | N |
M/K | 0.2168 | likely_benign | 0.2538 | benign | -1.247 | Destabilizing | 0.994 | D | 0.687 | prob.neutral | D | 0.522957194 | None | None | N |
M/L | 0.1088 | likely_benign | 0.1203 | benign | -1.201 | Destabilizing | 0.927 | D | 0.394 | neutral | N | 0.434874062 | None | None | N |
M/N | 0.5998 | likely_pathogenic | 0.696 | pathogenic | -1.248 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
M/P | 0.9435 | likely_pathogenic | 0.965 | pathogenic | -1.552 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
M/Q | 0.3194 | likely_benign | 0.3677 | ambiguous | -1.19 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
M/R | 0.2207 | likely_benign | 0.266 | benign | -0.923 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | D | 0.522783835 | None | None | N |
M/S | 0.4639 | ambiguous | 0.5341 | ambiguous | -1.912 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | N |
M/T | 0.1815 | likely_benign | 0.2139 | benign | -1.678 | Destabilizing | 0.994 | D | 0.691 | prob.neutral | N | 0.447285999 | None | None | N |
M/V | 0.086 | likely_benign | 0.0939 | benign | -1.552 | Destabilizing | 0.985 | D | 0.562 | neutral | N | 0.44576306 | None | None | N |
M/W | 0.541 | ambiguous | 0.6005 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
M/Y | 0.5026 | ambiguous | 0.5805 | pathogenic | -1.078 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.