Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27324 | 82195;82196;82197 | chr2:178564162;178564161;178564160 | chr2:179428889;179428888;179428887 |
N2AB | 25683 | 77272;77273;77274 | chr2:178564162;178564161;178564160 | chr2:179428889;179428888;179428887 |
N2A | 24756 | 74491;74492;74493 | chr2:178564162;178564161;178564160 | chr2:179428889;179428888;179428887 |
N2B | 18259 | 55000;55001;55002 | chr2:178564162;178564161;178564160 | chr2:179428889;179428888;179428887 |
Novex-1 | 18384 | 55375;55376;55377 | chr2:178564162;178564161;178564160 | chr2:179428889;179428888;179428887 |
Novex-2 | 18451 | 55576;55577;55578 | chr2:178564162;178564161;178564160 | chr2:179428889;179428888;179428887 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.761 | 0.468 | 0.539612970712 | gnomAD-4.0.0 | 6.84216E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99475E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2262 | likely_benign | 0.2394 | benign | -0.638 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | N | 0.49435329 | None | None | N |
E/C | 0.8843 | likely_pathogenic | 0.8992 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/D | 0.1573 | likely_benign | 0.1912 | benign | -0.692 | Destabilizing | 0.999 | D | 0.456 | neutral | N | 0.50435279 | None | None | N |
E/F | 0.791 | likely_pathogenic | 0.8147 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/G | 0.3039 | likely_benign | 0.3277 | benign | -0.948 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.498342989 | None | None | N |
E/H | 0.5641 | likely_pathogenic | 0.5986 | pathogenic | -0.102 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/I | 0.3538 | ambiguous | 0.3633 | ambiguous | 0.189 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
E/K | 0.3077 | likely_benign | 0.3427 | ambiguous | -0.074 | Destabilizing | 0.999 | D | 0.586 | neutral | N | 0.508294386 | None | None | N |
E/L | 0.5123 | ambiguous | 0.5195 | ambiguous | 0.189 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
E/M | 0.4906 | ambiguous | 0.5044 | ambiguous | 0.376 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.3076 | likely_benign | 0.3421 | ambiguous | -0.638 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/P | 0.9784 | likely_pathogenic | 0.9865 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
E/Q | 0.1944 | likely_benign | 0.2008 | benign | -0.53 | Destabilizing | 1.0 | D | 0.615 | neutral | N | 0.512470841 | None | None | N |
E/R | 0.4807 | ambiguous | 0.5246 | ambiguous | 0.227 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/S | 0.2801 | likely_benign | 0.2918 | benign | -0.849 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
E/T | 0.2494 | likely_benign | 0.2555 | benign | -0.586 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
E/V | 0.2112 | likely_benign | 0.2129 | benign | -0.065 | Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.525093422 | None | None | N |
E/W | 0.9334 | likely_pathogenic | 0.9448 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Y | 0.7054 | likely_pathogenic | 0.7394 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.