Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27331 | 82216;82217;82218 | chr2:178564141;178564140;178564139 | chr2:179428868;179428867;179428866 |
N2AB | 25690 | 77293;77294;77295 | chr2:178564141;178564140;178564139 | chr2:179428868;179428867;179428866 |
N2A | 24763 | 74512;74513;74514 | chr2:178564141;178564140;178564139 | chr2:179428868;179428867;179428866 |
N2B | 18266 | 55021;55022;55023 | chr2:178564141;178564140;178564139 | chr2:179428868;179428867;179428866 |
Novex-1 | 18391 | 55396;55397;55398 | chr2:178564141;178564140;178564139 | chr2:179428868;179428867;179428866 |
Novex-2 | 18458 | 55597;55598;55599 | chr2:178564141;178564140;178564139 | chr2:179428868;179428867;179428866 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.002 | N | 0.284 | 0.127 | 0.0986583533028 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.282 | likely_benign | 0.3112 | benign | -0.347 | Destabilizing | 0.067 | N | 0.491 | neutral | None | None | None | None | N |
K/C | 0.4508 | ambiguous | 0.5104 | ambiguous | -0.756 | Destabilizing | 0.935 | D | 0.599 | neutral | None | None | None | None | N |
K/D | 0.4705 | ambiguous | 0.4966 | ambiguous | -0.869 | Destabilizing | 0.081 | N | 0.523 | neutral | None | None | None | None | N |
K/E | 0.1585 | likely_benign | 0.1686 | benign | -0.819 | Destabilizing | 0.027 | N | 0.48 | neutral | N | 0.496135952 | None | None | N |
K/F | 0.5998 | likely_pathogenic | 0.6367 | pathogenic | -0.597 | Destabilizing | 0.555 | D | 0.599 | neutral | None | None | None | None | N |
K/G | 0.3541 | ambiguous | 0.3819 | ambiguous | -0.625 | Destabilizing | 0.149 | N | 0.528 | neutral | None | None | None | None | N |
K/H | 0.185 | likely_benign | 0.1972 | benign | -1.11 | Destabilizing | 0.001 | N | 0.276 | neutral | None | None | None | None | N |
K/I | 0.305 | likely_benign | 0.3462 | ambiguous | 0.335 | Stabilizing | 0.484 | N | 0.61 | neutral | N | 0.494058439 | None | None | N |
K/L | 0.2894 | likely_benign | 0.3195 | benign | 0.335 | Stabilizing | 0.149 | N | 0.553 | neutral | None | None | None | None | N |
K/M | 0.1639 | likely_benign | 0.1832 | benign | 0.416 | Stabilizing | 0.935 | D | 0.575 | neutral | None | None | None | None | N |
K/N | 0.2476 | likely_benign | 0.2657 | benign | -0.512 | Destabilizing | 0.002 | N | 0.284 | neutral | N | 0.465583758 | None | None | N |
K/P | 0.9165 | likely_pathogenic | 0.9159 | pathogenic | 0.137 | Stabilizing | 0.555 | D | 0.604 | neutral | None | None | None | None | N |
K/Q | 0.104 | likely_benign | 0.1104 | benign | -0.818 | Destabilizing | 0.117 | N | 0.498 | neutral | N | 0.49734946 | None | None | N |
K/R | 0.0716 | likely_benign | 0.0728 | benign | -0.352 | Destabilizing | None | N | 0.112 | neutral | N | 0.43048975 | None | None | N |
K/S | 0.2735 | likely_benign | 0.2953 | benign | -1.016 | Destabilizing | 0.149 | N | 0.449 | neutral | None | None | None | None | N |
K/T | 0.1241 | likely_benign | 0.1336 | benign | -0.798 | Destabilizing | 0.117 | N | 0.507 | neutral | N | 0.433279339 | None | None | N |
K/V | 0.2833 | likely_benign | 0.3163 | benign | 0.137 | Stabilizing | 0.38 | N | 0.583 | neutral | None | None | None | None | N |
K/W | 0.56 | ambiguous | 0.6186 | pathogenic | -0.549 | Destabilizing | 0.935 | D | 0.627 | neutral | None | None | None | None | N |
K/Y | 0.4028 | ambiguous | 0.4408 | ambiguous | -0.103 | Destabilizing | 0.38 | N | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.