Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27333 | 82222;82223;82224 | chr2:178564135;178564134;178564133 | chr2:179428862;179428861;179428860 |
N2AB | 25692 | 77299;77300;77301 | chr2:178564135;178564134;178564133 | chr2:179428862;179428861;179428860 |
N2A | 24765 | 74518;74519;74520 | chr2:178564135;178564134;178564133 | chr2:179428862;179428861;179428860 |
N2B | 18268 | 55027;55028;55029 | chr2:178564135;178564134;178564133 | chr2:179428862;179428861;179428860 |
Novex-1 | 18393 | 55402;55403;55404 | chr2:178564135;178564134;178564133 | chr2:179428862;179428861;179428860 |
Novex-2 | 18460 | 55603;55604;55605 | chr2:178564135;178564134;178564133 | chr2:179428862;179428861;179428860 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1277663410 | 0.315 | 0.001 | N | 0.382 | 0.179 | 0.312001716656 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1277663410 | 0.315 | 0.001 | N | 0.382 | 0.179 | 0.312001716656 | gnomAD-4.0.0 | 1.59131E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0715 | likely_benign | 0.0721 | benign | -1.17 | Destabilizing | 0.09 | N | 0.455 | neutral | N | 0.519594388 | None | None | N |
T/C | 0.2441 | likely_benign | 0.2597 | benign | -0.953 | Destabilizing | 0.944 | D | 0.655 | neutral | None | None | None | None | N |
T/D | 0.3653 | ambiguous | 0.405 | ambiguous | -1.679 | Destabilizing | 0.388 | N | 0.629 | neutral | None | None | None | None | N |
T/E | 0.259 | likely_benign | 0.2869 | benign | -1.462 | Destabilizing | 0.241 | N | 0.629 | neutral | None | None | None | None | N |
T/F | 0.1576 | likely_benign | 0.179 | benign | -0.725 | Destabilizing | 0.69 | D | 0.653 | neutral | None | None | None | None | N |
T/G | 0.2078 | likely_benign | 0.2239 | benign | -1.608 | Destabilizing | 0.241 | N | 0.639 | neutral | None | None | None | None | N |
T/H | 0.1993 | likely_benign | 0.2112 | benign | -1.719 | Destabilizing | 0.944 | D | 0.67 | neutral | None | None | None | None | N |
T/I | 0.1003 | likely_benign | 0.1096 | benign | -0.014 | Destabilizing | 0.001 | N | 0.382 | neutral | N | 0.486156605 | None | None | N |
T/K | 0.2077 | likely_benign | 0.223 | benign | -0.701 | Destabilizing | 0.241 | N | 0.63 | neutral | None | None | None | None | N |
T/L | 0.0759 | likely_benign | 0.0816 | benign | -0.014 | Destabilizing | 0.054 | N | 0.506 | neutral | None | None | None | None | N |
T/M | 0.0763 | likely_benign | 0.0796 | benign | -0.064 | Destabilizing | 0.69 | D | 0.659 | neutral | None | None | None | None | N |
T/N | 0.1108 | likely_benign | 0.1134 | benign | -1.469 | Destabilizing | 0.457 | N | 0.641 | neutral | N | 0.507454597 | None | None | N |
T/P | 0.6433 | likely_pathogenic | 0.6926 | pathogenic | -0.367 | Destabilizing | 0.627 | D | 0.657 | neutral | N | 0.514604501 | None | None | N |
T/Q | 0.1976 | likely_benign | 0.2094 | benign | -1.184 | Destabilizing | 0.69 | D | 0.653 | neutral | None | None | None | None | N |
T/R | 0.1514 | likely_benign | 0.164 | benign | -0.955 | Destabilizing | 0.69 | D | 0.654 | neutral | None | None | None | None | N |
T/S | 0.0834 | likely_benign | 0.0861 | benign | -1.663 | Destabilizing | 0.001 | N | 0.355 | neutral | N | 0.420987619 | None | None | N |
T/V | 0.0892 | likely_benign | 0.0948 | benign | -0.367 | Destabilizing | 0.004 | N | 0.297 | neutral | None | None | None | None | N |
T/W | 0.4672 | ambiguous | 0.524 | ambiguous | -0.924 | Destabilizing | 0.981 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/Y | 0.1957 | likely_benign | 0.2217 | benign | -0.541 | Destabilizing | 0.818 | D | 0.652 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.