Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27339 | 82240;82241;82242 | chr2:178564117;178564116;178564115 | chr2:179428844;179428843;179428842 |
N2AB | 25698 | 77317;77318;77319 | chr2:178564117;178564116;178564115 | chr2:179428844;179428843;179428842 |
N2A | 24771 | 74536;74537;74538 | chr2:178564117;178564116;178564115 | chr2:179428844;179428843;179428842 |
N2B | 18274 | 55045;55046;55047 | chr2:178564117;178564116;178564115 | chr2:179428844;179428843;179428842 |
Novex-1 | 18399 | 55420;55421;55422 | chr2:178564117;178564116;178564115 | chr2:179428844;179428843;179428842 |
Novex-2 | 18466 | 55621;55622;55623 | chr2:178564117;178564116;178564115 | chr2:179428844;179428843;179428842 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.999 | N | 0.789 | 0.417 | 0.764677420096 | gnomAD-4.0.0 | 4.10525E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49748E-06 | 0 | 1.65667E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2642 | likely_benign | 0.295 | benign | -1.166 | Destabilizing | 0.469 | N | 0.274 | neutral | None | None | None | None | N |
C/D | 0.9856 | likely_pathogenic | 0.9885 | pathogenic | -1.734 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
C/E | 0.9949 | likely_pathogenic | 0.996 | pathogenic | -1.561 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
C/F | 0.8843 | likely_pathogenic | 0.8968 | pathogenic | -1.017 | Destabilizing | 0.999 | D | 0.775 | deleterious | N | 0.494402516 | None | None | N |
C/G | 0.2609 | likely_benign | 0.2795 | benign | -1.434 | Destabilizing | 0.98 | D | 0.735 | prob.delet. | N | 0.490136555 | None | None | N |
C/H | 0.9805 | likely_pathogenic | 0.9835 | pathogenic | -1.982 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
C/I | 0.7593 | likely_pathogenic | 0.7873 | pathogenic | -0.485 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
C/K | 0.997 | likely_pathogenic | 0.9975 | pathogenic | -0.908 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
C/L | 0.7963 | likely_pathogenic | 0.808 | pathogenic | -0.485 | Destabilizing | 0.985 | D | 0.634 | neutral | None | None | None | None | N |
C/M | 0.8966 | likely_pathogenic | 0.8938 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
C/N | 0.9162 | likely_pathogenic | 0.9274 | pathogenic | -1.346 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
C/P | 0.9715 | likely_pathogenic | 0.9728 | pathogenic | -0.688 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
C/Q | 0.985 | likely_pathogenic | 0.9869 | pathogenic | -1.073 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
C/R | 0.9737 | likely_pathogenic | 0.9779 | pathogenic | -1.249 | Destabilizing | 0.997 | D | 0.813 | deleterious | N | 0.51301375 | None | None | N |
C/S | 0.2545 | likely_benign | 0.2755 | benign | -1.504 | Destabilizing | 0.961 | D | 0.671 | neutral | N | 0.488420546 | None | None | N |
C/T | 0.4632 | ambiguous | 0.4569 | ambiguous | -1.184 | Destabilizing | 0.985 | D | 0.717 | prob.delet. | None | None | None | None | N |
C/V | 0.533 | ambiguous | 0.5713 | pathogenic | -0.688 | Destabilizing | 0.985 | D | 0.671 | neutral | None | None | None | None | N |
C/W | 0.9841 | likely_pathogenic | 0.9857 | pathogenic | -1.52 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.513267239 | None | None | N |
C/Y | 0.9588 | likely_pathogenic | 0.9666 | pathogenic | -1.156 | Destabilizing | 0.999 | D | 0.789 | deleterious | N | 0.501657444 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.