Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27363 | 82312;82313;82314 | chr2:178564045;178564044;178564043 | chr2:179428772;179428771;179428770 |
N2AB | 25722 | 77389;77390;77391 | chr2:178564045;178564044;178564043 | chr2:179428772;179428771;179428770 |
N2A | 24795 | 74608;74609;74610 | chr2:178564045;178564044;178564043 | chr2:179428772;179428771;179428770 |
N2B | 18298 | 55117;55118;55119 | chr2:178564045;178564044;178564043 | chr2:179428772;179428771;179428770 |
Novex-1 | 18423 | 55492;55493;55494 | chr2:178564045;178564044;178564043 | chr2:179428772;179428771;179428770 |
Novex-2 | 18490 | 55693;55694;55695 | chr2:178564045;178564044;178564043 | chr2:179428772;179428771;179428770 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.007 | N | 0.3 | 0.222 | 0.272639205421 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0735 | likely_benign | 0.0779 | benign | -0.959 | Destabilizing | 0.472 | N | 0.506 | neutral | N | 0.490962205 | None | None | I |
T/C | 0.324 | likely_benign | 0.3474 | ambiguous | -0.641 | Destabilizing | 0.996 | D | 0.571 | neutral | None | None | None | None | I |
T/D | 0.3228 | likely_benign | 0.3553 | ambiguous | 0.063 | Stabilizing | 0.59 | D | 0.516 | neutral | None | None | None | None | I |
T/E | 0.2809 | likely_benign | 0.3049 | benign | 0.109 | Stabilizing | 0.742 | D | 0.553 | neutral | None | None | None | None | I |
T/F | 0.1691 | likely_benign | 0.1908 | benign | -0.895 | Destabilizing | 0.91 | D | 0.617 | neutral | None | None | None | None | I |
T/G | 0.2545 | likely_benign | 0.2706 | benign | -1.254 | Destabilizing | 0.742 | D | 0.563 | neutral | None | None | None | None | I |
T/H | 0.1727 | likely_benign | 0.1924 | benign | -1.424 | Destabilizing | 0.953 | D | 0.599 | neutral | None | None | None | None | I |
T/I | 0.1012 | likely_benign | 0.1134 | benign | -0.25 | Destabilizing | 0.007 | N | 0.3 | neutral | N | 0.51724473 | None | None | I |
T/K | 0.1684 | likely_benign | 0.1929 | benign | -0.574 | Destabilizing | 0.742 | D | 0.559 | neutral | None | None | None | None | I |
T/L | 0.0774 | likely_benign | 0.0828 | benign | -0.25 | Destabilizing | 0.17 | N | 0.492 | neutral | None | None | None | None | I |
T/M | 0.074 | likely_benign | 0.0793 | benign | -0.12 | Destabilizing | 0.91 | D | 0.592 | neutral | None | None | None | None | I |
T/N | 0.0867 | likely_benign | 0.0914 | benign | -0.622 | Destabilizing | 0.012 | N | 0.166 | neutral | N | 0.408999757 | None | None | I |
T/P | 0.1851 | likely_benign | 0.2037 | benign | -0.454 | Destabilizing | 0.979 | D | 0.619 | neutral | D | 0.531424748 | None | None | I |
T/Q | 0.1959 | likely_benign | 0.2101 | benign | -0.698 | Destabilizing | 0.953 | D | 0.617 | neutral | None | None | None | None | I |
T/R | 0.1358 | likely_benign | 0.1584 | benign | -0.472 | Destabilizing | 0.953 | D | 0.604 | neutral | None | None | None | None | I |
T/S | 0.0981 | likely_benign | 0.1047 | benign | -1.009 | Destabilizing | 0.472 | N | 0.5 | neutral | N | 0.467775915 | None | None | I |
T/V | 0.0932 | likely_benign | 0.1012 | benign | -0.454 | Destabilizing | 0.17 | N | 0.501 | neutral | None | None | None | None | I |
T/W | 0.4684 | ambiguous | 0.5076 | ambiguous | -0.794 | Destabilizing | 0.996 | D | 0.604 | neutral | None | None | None | None | I |
T/Y | 0.1937 | likely_benign | 0.2071 | benign | -0.55 | Destabilizing | 0.953 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.