Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2739582408;82409;82410 chr2:178563949;178563948;178563947chr2:179428676;179428675;179428674
N2AB2575477485;77486;77487 chr2:178563949;178563948;178563947chr2:179428676;179428675;179428674
N2A2482774704;74705;74706 chr2:178563949;178563948;178563947chr2:179428676;179428675;179428674
N2B1833055213;55214;55215 chr2:178563949;178563948;178563947chr2:179428676;179428675;179428674
Novex-11845555588;55589;55590 chr2:178563949;178563948;178563947chr2:179428676;179428675;179428674
Novex-21852255789;55790;55791 chr2:178563949;178563948;178563947chr2:179428676;179428675;179428674
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTG
  • RefSeq wild type template codon: AAC
  • Domain: Fn3-87
  • Domain position: 27
  • Structural Position: 28
  • Q(SASA): 0.889
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V rs1304635139 None 0.166 N 0.305 0.04 0.137902524267 gnomAD-3.1.2 3.29E-05 None None None None I None 1.20726E-04 0 0 0 0 None 0 0 0 0 0
L/V rs1304635139 None 0.166 N 0.305 0.04 0.137902524267 gnomAD-4.0.0 6.09032E-06 None None None None I None 1.04891E-04 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1123 likely_benign 0.1224 benign -0.497 Destabilizing 0.002 N 0.155 neutral None None None None I
L/C 0.3662 ambiguous 0.3918 ambiguous -0.501 Destabilizing 0.991 D 0.271 neutral None None None None I
L/D 0.4218 ambiguous 0.461 ambiguous -0.228 Destabilizing 0.39 N 0.383 neutral None None None None I
L/E 0.1704 likely_benign 0.1803 benign -0.337 Destabilizing 0.004 N 0.238 neutral None None None None I
L/F 0.1168 likely_benign 0.1358 benign -0.635 Destabilizing 0.954 D 0.285 neutral N 0.48788965 None None I
L/G 0.2725 likely_benign 0.3028 benign -0.638 Destabilizing 0.209 N 0.331 neutral None None None None I
L/H 0.153 likely_benign 0.1764 benign -0.025 Destabilizing 0.901 D 0.247 neutral None None None None I
L/I 0.0868 likely_benign 0.0926 benign -0.257 Destabilizing 0.561 D 0.316 neutral None None None None I
L/K 0.1313 likely_benign 0.1406 benign -0.246 Destabilizing 0.017 N 0.216 neutral None None None None I
L/M 0.1034 likely_benign 0.1086 benign -0.312 Destabilizing 0.954 D 0.323 neutral N 0.510419466 None None I
L/N 0.2431 likely_benign 0.265 benign 0.018 Stabilizing 0.561 D 0.394 neutral None None None None I
L/P 0.1885 likely_benign 0.2119 benign -0.304 Destabilizing 0.901 D 0.363 neutral None None None None I
L/Q 0.0865 likely_benign 0.0918 benign -0.238 Destabilizing 0.39 N 0.376 neutral None None None None I
L/R 0.1103 likely_benign 0.1264 benign 0.299 Stabilizing 0.39 N 0.386 neutral None None None None I
L/S 0.1289 likely_benign 0.1348 benign -0.386 Destabilizing 0.005 N 0.172 neutral N 0.432726686 None None I
L/T 0.1321 likely_benign 0.1365 benign -0.391 Destabilizing 0.017 N 0.217 neutral None None None None I
L/V 0.0793 likely_benign 0.085 benign -0.304 Destabilizing 0.166 N 0.305 neutral N 0.449563008 None None I
L/W 0.1947 likely_benign 0.2309 benign -0.654 Destabilizing 0.987 D 0.28 neutral N 0.514633207 None None I
L/Y 0.2383 likely_benign 0.2741 benign -0.388 Destabilizing 0.965 D 0.283 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.