Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27395 | 82408;82409;82410 | chr2:178563949;178563948;178563947 | chr2:179428676;179428675;179428674 |
N2AB | 25754 | 77485;77486;77487 | chr2:178563949;178563948;178563947 | chr2:179428676;179428675;179428674 |
N2A | 24827 | 74704;74705;74706 | chr2:178563949;178563948;178563947 | chr2:179428676;179428675;179428674 |
N2B | 18330 | 55213;55214;55215 | chr2:178563949;178563948;178563947 | chr2:179428676;179428675;179428674 |
Novex-1 | 18455 | 55588;55589;55590 | chr2:178563949;178563948;178563947 | chr2:179428676;179428675;179428674 |
Novex-2 | 18522 | 55789;55790;55791 | chr2:178563949;178563948;178563947 | chr2:179428676;179428675;179428674 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1304635139 | None | 0.166 | N | 0.305 | 0.04 | 0.137902524267 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 1.20726E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs1304635139 | None | 0.166 | N | 0.305 | 0.04 | 0.137902524267 | gnomAD-4.0.0 | 6.09032E-06 | None | None | None | None | I | None | 1.04891E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1123 | likely_benign | 0.1224 | benign | -0.497 | Destabilizing | 0.002 | N | 0.155 | neutral | None | None | None | None | I |
L/C | 0.3662 | ambiguous | 0.3918 | ambiguous | -0.501 | Destabilizing | 0.991 | D | 0.271 | neutral | None | None | None | None | I |
L/D | 0.4218 | ambiguous | 0.461 | ambiguous | -0.228 | Destabilizing | 0.39 | N | 0.383 | neutral | None | None | None | None | I |
L/E | 0.1704 | likely_benign | 0.1803 | benign | -0.337 | Destabilizing | 0.004 | N | 0.238 | neutral | None | None | None | None | I |
L/F | 0.1168 | likely_benign | 0.1358 | benign | -0.635 | Destabilizing | 0.954 | D | 0.285 | neutral | N | 0.48788965 | None | None | I |
L/G | 0.2725 | likely_benign | 0.3028 | benign | -0.638 | Destabilizing | 0.209 | N | 0.331 | neutral | None | None | None | None | I |
L/H | 0.153 | likely_benign | 0.1764 | benign | -0.025 | Destabilizing | 0.901 | D | 0.247 | neutral | None | None | None | None | I |
L/I | 0.0868 | likely_benign | 0.0926 | benign | -0.257 | Destabilizing | 0.561 | D | 0.316 | neutral | None | None | None | None | I |
L/K | 0.1313 | likely_benign | 0.1406 | benign | -0.246 | Destabilizing | 0.017 | N | 0.216 | neutral | None | None | None | None | I |
L/M | 0.1034 | likely_benign | 0.1086 | benign | -0.312 | Destabilizing | 0.954 | D | 0.323 | neutral | N | 0.510419466 | None | None | I |
L/N | 0.2431 | likely_benign | 0.265 | benign | 0.018 | Stabilizing | 0.561 | D | 0.394 | neutral | None | None | None | None | I |
L/P | 0.1885 | likely_benign | 0.2119 | benign | -0.304 | Destabilizing | 0.901 | D | 0.363 | neutral | None | None | None | None | I |
L/Q | 0.0865 | likely_benign | 0.0918 | benign | -0.238 | Destabilizing | 0.39 | N | 0.376 | neutral | None | None | None | None | I |
L/R | 0.1103 | likely_benign | 0.1264 | benign | 0.299 | Stabilizing | 0.39 | N | 0.386 | neutral | None | None | None | None | I |
L/S | 0.1289 | likely_benign | 0.1348 | benign | -0.386 | Destabilizing | 0.005 | N | 0.172 | neutral | N | 0.432726686 | None | None | I |
L/T | 0.1321 | likely_benign | 0.1365 | benign | -0.391 | Destabilizing | 0.017 | N | 0.217 | neutral | None | None | None | None | I |
L/V | 0.0793 | likely_benign | 0.085 | benign | -0.304 | Destabilizing | 0.166 | N | 0.305 | neutral | N | 0.449563008 | None | None | I |
L/W | 0.1947 | likely_benign | 0.2309 | benign | -0.654 | Destabilizing | 0.987 | D | 0.28 | neutral | N | 0.514633207 | None | None | I |
L/Y | 0.2383 | likely_benign | 0.2741 | benign | -0.388 | Destabilizing | 0.965 | D | 0.283 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.