Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27396 | 82411;82412;82413 | chr2:178563946;178563945;178563944 | chr2:179428673;179428672;179428671 |
N2AB | 25755 | 77488;77489;77490 | chr2:178563946;178563945;178563944 | chr2:179428673;179428672;179428671 |
N2A | 24828 | 74707;74708;74709 | chr2:178563946;178563945;178563944 | chr2:179428673;179428672;179428671 |
N2B | 18331 | 55216;55217;55218 | chr2:178563946;178563945;178563944 | chr2:179428673;179428672;179428671 |
Novex-1 | 18456 | 55591;55592;55593 | chr2:178563946;178563945;178563944 | chr2:179428673;179428672;179428671 |
Novex-2 | 18523 | 55792;55793;55794 | chr2:178563946;178563945;178563944 | chr2:179428673;179428672;179428671 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs371604558 | 0.287 | 0.285 | N | 0.363 | 0.316 | None | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 6.46E-05 | 1.16003E-04 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
Q/E | rs371604558 | 0.287 | 0.285 | N | 0.363 | 0.316 | None | gnomAD-3.1.2 | 7.23E-05 | None | None | None | None | I | None | 4.83E-05 | 3.93443E-04 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
Q/E | rs371604558 | 0.287 | 0.285 | N | 0.363 | 0.316 | None | gnomAD-4.0.0 | 2.1072E-05 | None | None | None | None | I | None | 2.67101E-05 | 1.66761E-04 | None | 0 | 0 | None | 0 | 0 | 1.69533E-05 | 0 | 3.20225E-05 |
Q/L | rs367804525 | 0.318 | 0.326 | N | 0.438 | 0.201 | None | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 6.46E-05 | 1.15982E-04 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
Q/L | rs367804525 | 0.318 | 0.326 | N | 0.438 | 0.201 | None | gnomAD-3.1.2 | 7.23E-05 | None | None | None | None | I | None | 4.83E-05 | 3.93185E-04 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
Q/L | rs367804525 | 0.318 | 0.326 | N | 0.438 | 0.201 | None | gnomAD-4.0.0 | 2.10706E-05 | None | None | None | None | I | None | 2.6698E-05 | 1.66728E-04 | None | 0 | 0 | None | 0 | 0 | 1.69531E-05 | 0 | 3.20225E-05 |
Q/R | rs367804525 | 0.436 | 0.491 | N | 0.367 | 0.167 | 0.202949470691 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Q/R | rs367804525 | 0.436 | 0.491 | N | 0.367 | 0.167 | 0.202949470691 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/R | rs367804525 | 0.436 | 0.491 | N | 0.367 | 0.167 | 0.202949470691 | gnomAD-4.0.0 | 1.23945E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47653E-07 | 1.09784E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2504 | likely_benign | 0.2434 | benign | -0.191 | Destabilizing | 0.345 | N | 0.38 | neutral | None | None | None | None | I |
Q/C | 0.5593 | ambiguous | 0.5677 | pathogenic | 0.189 | Stabilizing | 0.991 | D | 0.371 | neutral | None | None | None | None | I |
Q/D | 0.2681 | likely_benign | 0.2777 | benign | 0.034 | Stabilizing | 0.561 | D | 0.345 | neutral | None | None | None | None | I |
Q/E | 0.0738 | likely_benign | 0.0782 | benign | 0.001 | Stabilizing | 0.285 | N | 0.363 | neutral | N | 0.410039041 | None | None | I |
Q/F | 0.6538 | likely_pathogenic | 0.6469 | pathogenic | -0.418 | Destabilizing | 0.39 | N | 0.47 | neutral | None | None | None | None | I |
Q/G | 0.3018 | likely_benign | 0.3009 | benign | -0.37 | Destabilizing | 0.561 | D | 0.438 | neutral | None | None | None | None | I |
Q/H | 0.1745 | likely_benign | 0.1885 | benign | -0.302 | Destabilizing | None | N | 0.071 | neutral | N | 0.416101009 | None | None | I |
Q/I | 0.5204 | ambiguous | 0.4986 | ambiguous | 0.19 | Stabilizing | 0.818 | D | 0.439 | neutral | None | None | None | None | I |
Q/K | 0.1508 | likely_benign | 0.1557 | benign | 0.079 | Stabilizing | 0.285 | N | 0.387 | neutral | N | 0.467201833 | None | None | I |
Q/L | 0.1517 | likely_benign | 0.1394 | benign | 0.19 | Stabilizing | 0.326 | N | 0.438 | neutral | N | 0.477264111 | None | None | I |
Q/M | 0.3955 | ambiguous | 0.3702 | ambiguous | 0.42 | Stabilizing | 0.965 | D | 0.322 | neutral | None | None | None | None | I |
Q/N | 0.246 | likely_benign | 0.2477 | benign | -0.2 | Destabilizing | 0.561 | D | 0.331 | neutral | None | None | None | None | I |
Q/P | 0.4658 | ambiguous | 0.4636 | ambiguous | 0.091 | Stabilizing | 0.954 | D | 0.398 | neutral | N | 0.458371706 | None | None | I |
Q/R | 0.1479 | likely_benign | 0.1523 | benign | 0.212 | Stabilizing | 0.491 | N | 0.367 | neutral | N | 0.438823153 | None | None | I |
Q/S | 0.2623 | likely_benign | 0.259 | benign | -0.197 | Destabilizing | 0.345 | N | 0.326 | neutral | None | None | None | None | I |
Q/T | 0.2864 | likely_benign | 0.2838 | benign | -0.077 | Destabilizing | 0.722 | D | 0.411 | neutral | None | None | None | None | I |
Q/V | 0.331 | likely_benign | 0.3124 | benign | 0.091 | Stabilizing | 0.561 | D | 0.463 | neutral | None | None | None | None | I |
Q/W | 0.5325 | ambiguous | 0.543 | ambiguous | -0.407 | Destabilizing | 0.972 | D | 0.364 | neutral | None | None | None | None | I |
Q/Y | 0.4027 | ambiguous | 0.408 | ambiguous | -0.146 | Destabilizing | 0.004 | N | 0.141 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.