Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27416 | 82471;82472;82473 | chr2:178563886;178563885;178563884 | chr2:179428613;179428612;179428611 |
N2AB | 25775 | 77548;77549;77550 | chr2:178563886;178563885;178563884 | chr2:179428613;179428612;179428611 |
N2A | 24848 | 74767;74768;74769 | chr2:178563886;178563885;178563884 | chr2:179428613;179428612;179428611 |
N2B | 18351 | 55276;55277;55278 | chr2:178563886;178563885;178563884 | chr2:179428613;179428612;179428611 |
Novex-1 | 18476 | 55651;55652;55653 | chr2:178563886;178563885;178563884 | chr2:179428613;179428612;179428611 |
Novex-2 | 18543 | 55852;55853;55854 | chr2:178563886;178563885;178563884 | chr2:179428613;179428612;179428611 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.994 | N | 0.608 | 0.443 | 0.515092168024 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79901E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0819 | likely_benign | 0.0903 | benign | -0.558 | Destabilizing | 0.773 | D | 0.448 | neutral | N | 0.476365607 | None | None | I |
S/C | 0.1186 | likely_benign | 0.1372 | benign | -0.443 | Destabilizing | 0.999 | D | 0.537 | neutral | N | 0.486767696 | None | None | I |
S/D | 0.8262 | likely_pathogenic | 0.873 | pathogenic | 0.257 | Stabilizing | 0.957 | D | 0.403 | neutral | None | None | None | None | I |
S/E | 0.8431 | likely_pathogenic | 0.8785 | pathogenic | 0.199 | Stabilizing | 0.916 | D | 0.426 | neutral | None | None | None | None | I |
S/F | 0.3649 | ambiguous | 0.4133 | ambiguous | -0.939 | Destabilizing | 0.994 | D | 0.608 | neutral | N | 0.480019746 | None | None | I |
S/G | 0.1618 | likely_benign | 0.1883 | benign | -0.724 | Destabilizing | 0.916 | D | 0.419 | neutral | None | None | None | None | I |
S/H | 0.6191 | likely_pathogenic | 0.6754 | pathogenic | -1.057 | Destabilizing | 0.997 | D | 0.497 | neutral | None | None | None | None | I |
S/I | 0.2481 | likely_benign | 0.2557 | benign | -0.242 | Destabilizing | 0.987 | D | 0.606 | neutral | None | None | None | None | I |
S/K | 0.9357 | likely_pathogenic | 0.9538 | pathogenic | -0.585 | Destabilizing | 0.845 | D | 0.427 | neutral | None | None | None | None | I |
S/L | 0.1009 | likely_benign | 0.1086 | benign | -0.242 | Destabilizing | 0.916 | D | 0.506 | neutral | None | None | None | None | I |
S/M | 0.2574 | likely_benign | 0.2662 | benign | -0.159 | Destabilizing | 0.999 | D | 0.504 | neutral | None | None | None | None | I |
S/N | 0.2792 | likely_benign | 0.3272 | benign | -0.36 | Destabilizing | 0.916 | D | 0.42 | neutral | None | None | None | None | I |
S/P | 0.6588 | likely_pathogenic | 0.704 | pathogenic | -0.316 | Destabilizing | 0.994 | D | 0.497 | neutral | N | 0.517558869 | None | None | I |
S/Q | 0.7159 | likely_pathogenic | 0.7583 | pathogenic | -0.539 | Destabilizing | 0.975 | D | 0.458 | neutral | None | None | None | None | I |
S/R | 0.8826 | likely_pathogenic | 0.9134 | pathogenic | -0.369 | Destabilizing | 0.073 | N | 0.345 | neutral | None | None | None | None | I |
S/T | 0.1202 | likely_benign | 0.1273 | benign | -0.47 | Destabilizing | 0.892 | D | 0.436 | neutral | N | 0.440983597 | None | None | I |
S/V | 0.2176 | likely_benign | 0.2254 | benign | -0.316 | Destabilizing | 0.987 | D | 0.597 | neutral | None | None | None | None | I |
S/W | 0.5386 | ambiguous | 0.5873 | pathogenic | -0.921 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
S/Y | 0.3526 | ambiguous | 0.4017 | ambiguous | -0.662 | Destabilizing | 0.994 | D | 0.61 | neutral | N | 0.486514206 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.