Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27428 | 82507;82508;82509 | chr2:178563850;178563849;178563848 | chr2:179428577;179428576;179428575 |
N2AB | 25787 | 77584;77585;77586 | chr2:178563850;178563849;178563848 | chr2:179428577;179428576;179428575 |
N2A | 24860 | 74803;74804;74805 | chr2:178563850;178563849;178563848 | chr2:179428577;179428576;179428575 |
N2B | 18363 | 55312;55313;55314 | chr2:178563850;178563849;178563848 | chr2:179428577;179428576;179428575 |
Novex-1 | 18488 | 55687;55688;55689 | chr2:178563850;178563849;178563848 | chr2:179428577;179428576;179428575 |
Novex-2 | 18555 | 55888;55889;55890 | chr2:178563850;178563849;178563848 | chr2:179428577;179428576;179428575 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs749118760 | 0.449 | 0.822 | N | 0.405 | 0.147 | 0.188950314367 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/K | rs749118760 | 0.449 | 0.822 | N | 0.405 | 0.147 | 0.188950314367 | gnomAD-4.0.0 | 2.0527E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99488E-07 | 2.31873E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2009 | likely_benign | 0.2418 | benign | -0.774 | Destabilizing | 0.559 | D | 0.481 | neutral | None | None | None | None | N |
N/C | 0.1872 | likely_benign | 0.205 | benign | -0.064 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
N/D | 0.2085 | likely_benign | 0.2548 | benign | -0.213 | Destabilizing | 0.822 | D | 0.427 | neutral | N | 0.501722625 | None | None | N |
N/E | 0.4833 | ambiguous | 0.5659 | pathogenic | -0.09 | Destabilizing | 0.86 | D | 0.4 | neutral | None | None | None | None | N |
N/F | 0.4546 | ambiguous | 0.5289 | ambiguous | -0.68 | Destabilizing | 0.978 | D | 0.713 | prob.delet. | None | None | None | None | N |
N/G | 0.2485 | likely_benign | 0.2856 | benign | -1.09 | Destabilizing | 0.559 | D | 0.417 | neutral | None | None | None | None | N |
N/H | 0.0899 | likely_benign | 0.1043 | benign | -0.649 | Destabilizing | 0.99 | D | 0.545 | neutral | N | 0.483040864 | None | None | N |
N/I | 0.1936 | likely_benign | 0.2255 | benign | 0.032 | Stabilizing | 0.97 | D | 0.692 | prob.neutral | N | 0.507821878 | None | None | N |
N/K | 0.3554 | ambiguous | 0.4494 | ambiguous | 0.011 | Stabilizing | 0.822 | D | 0.405 | neutral | N | 0.471938436 | None | None | N |
N/L | 0.2101 | likely_benign | 0.2357 | benign | 0.032 | Stabilizing | 0.86 | D | 0.625 | neutral | None | None | None | None | N |
N/M | 0.3048 | likely_benign | 0.3379 | benign | 0.091 | Stabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
N/P | 0.7679 | likely_pathogenic | 0.8139 | pathogenic | -0.209 | Destabilizing | 0.978 | D | 0.661 | neutral | None | None | None | None | N |
N/Q | 0.3019 | likely_benign | 0.355 | ambiguous | -0.467 | Destabilizing | 0.956 | D | 0.522 | neutral | None | None | None | None | N |
N/R | 0.3523 | ambiguous | 0.432 | ambiguous | -0.011 | Destabilizing | 0.956 | D | 0.499 | neutral | None | None | None | None | N |
N/S | 0.0707 | likely_benign | 0.0735 | benign | -0.709 | Destabilizing | 0.009 | N | 0.248 | neutral | N | 0.389645126 | None | None | N |
N/T | 0.0964 | likely_benign | 0.1077 | benign | -0.391 | Destabilizing | 0.489 | N | 0.419 | neutral | N | 0.415717006 | None | None | N |
N/V | 0.1994 | likely_benign | 0.2341 | benign | -0.209 | Destabilizing | 0.956 | D | 0.657 | neutral | None | None | None | None | N |
N/W | 0.6998 | likely_pathogenic | 0.7565 | pathogenic | -0.533 | Destabilizing | 0.998 | D | 0.696 | prob.neutral | None | None | None | None | N |
N/Y | 0.136 | likely_benign | 0.1572 | benign | -0.25 | Destabilizing | 0.99 | D | 0.683 | prob.neutral | N | 0.507821878 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.