Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27430 | 82513;82514;82515 | chr2:178563844;178563843;178563842 | chr2:179428571;179428570;179428569 |
N2AB | 25789 | 77590;77591;77592 | chr2:178563844;178563843;178563842 | chr2:179428571;179428570;179428569 |
N2A | 24862 | 74809;74810;74811 | chr2:178563844;178563843;178563842 | chr2:179428571;179428570;179428569 |
N2B | 18365 | 55318;55319;55320 | chr2:178563844;178563843;178563842 | chr2:179428571;179428570;179428569 |
Novex-1 | 18490 | 55693;55694;55695 | chr2:178563844;178563843;178563842 | chr2:179428571;179428570;179428569 |
Novex-2 | 18557 | 55894;55895;55896 | chr2:178563844;178563843;178563842 | chr2:179428571;179428570;179428569 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.73 | 0.308 | 0.191931220699 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.775E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.999 | N | 0.514 | 0.336 | 0.243398259712 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8248 | likely_pathogenic | 0.7884 | pathogenic | -0.736 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/C | 0.8876 | likely_pathogenic | 0.8782 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
K/D | 0.9596 | likely_pathogenic | 0.9574 | pathogenic | -0.272 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
K/E | 0.7705 | likely_pathogenic | 0.7385 | pathogenic | -0.123 | Destabilizing | 0.999 | D | 0.551 | neutral | N | 0.489273403 | None | None | N |
K/F | 0.9712 | likely_pathogenic | 0.9699 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
K/G | 0.9102 | likely_pathogenic | 0.8948 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/H | 0.642 | likely_pathogenic | 0.6217 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
K/I | 0.7508 | likely_pathogenic | 0.738 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.905 | deleterious | N | 0.512150262 | None | None | N |
K/L | 0.7887 | likely_pathogenic | 0.7645 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/M | 0.6417 | likely_pathogenic | 0.5878 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
K/N | 0.9193 | likely_pathogenic | 0.9043 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.467975411 | None | None | N |
K/P | 0.9157 | likely_pathogenic | 0.9079 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
K/Q | 0.4483 | ambiguous | 0.4032 | ambiguous | -0.565 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.501645267 | None | None | N |
K/R | 0.1058 | likely_benign | 0.1067 | benign | -0.463 | Destabilizing | 0.999 | D | 0.514 | neutral | N | 0.471285075 | None | None | N |
K/S | 0.8845 | likely_pathogenic | 0.8579 | pathogenic | -1.208 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
K/T | 0.5747 | likely_pathogenic | 0.5163 | ambiguous | -0.848 | Destabilizing | 1.0 | D | 0.802 | deleterious | N | 0.395338947 | None | None | N |
K/V | 0.6872 | likely_pathogenic | 0.6651 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
K/W | 0.9311 | likely_pathogenic | 0.9358 | pathogenic | -0.271 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
K/Y | 0.9107 | likely_pathogenic | 0.9053 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.