Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27445 | 82558;82559;82560 | chr2:178563799;178563798;178563797 | chr2:179428526;179428525;179428524 |
N2AB | 25804 | 77635;77636;77637 | chr2:178563799;178563798;178563797 | chr2:179428526;179428525;179428524 |
N2A | 24877 | 74854;74855;74856 | chr2:178563799;178563798;178563797 | chr2:179428526;179428525;179428524 |
N2B | 18380 | 55363;55364;55365 | chr2:178563799;178563798;178563797 | chr2:179428526;179428525;179428524 |
Novex-1 | 18505 | 55738;55739;55740 | chr2:178563799;178563798;178563797 | chr2:179428526;179428525;179428524 |
Novex-2 | 18572 | 55939;55940;55941 | chr2:178563799;178563798;178563797 | chr2:179428526;179428525;179428524 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | 0.002 | N | 0.383 | 0.284 | 0.503248607038 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.421 | ambiguous | 0.38 | ambiguous | -2.577 | Highly Destabilizing | 0.103 | N | 0.546 | neutral | None | None | None | None | N |
M/C | 0.6378 | likely_pathogenic | 0.6051 | pathogenic | -2.4 | Highly Destabilizing | 0.965 | D | 0.699 | prob.neutral | None | None | None | None | N |
M/D | 0.9502 | likely_pathogenic | 0.943 | pathogenic | -2.3 | Highly Destabilizing | 0.561 | D | 0.685 | prob.neutral | None | None | None | None | N |
M/E | 0.72 | likely_pathogenic | 0.6864 | pathogenic | -2.116 | Highly Destabilizing | 0.209 | N | 0.648 | neutral | None | None | None | None | N |
M/F | 0.4788 | ambiguous | 0.4866 | ambiguous | -1.026 | Destabilizing | 0.722 | D | 0.609 | neutral | None | None | None | None | N |
M/G | 0.7271 | likely_pathogenic | 0.6976 | pathogenic | -3.0 | Highly Destabilizing | 0.345 | N | 0.669 | neutral | None | None | None | None | N |
M/H | 0.6406 | likely_pathogenic | 0.6108 | pathogenic | -2.45 | Highly Destabilizing | 0.901 | D | 0.689 | prob.neutral | None | None | None | None | N |
M/I | 0.5824 | likely_pathogenic | 0.5046 | ambiguous | -1.369 | Destabilizing | 0.166 | N | 0.521 | neutral | N | 0.434534841 | None | None | N |
M/K | 0.2484 | likely_benign | 0.2411 | benign | -1.809 | Destabilizing | 0.001 | N | 0.405 | neutral | N | 0.458102347 | None | None | N |
M/L | 0.1991 | likely_benign | 0.2019 | benign | -1.369 | Destabilizing | 0.036 | N | 0.431 | neutral | N | 0.445943913 | None | None | N |
M/N | 0.6851 | likely_pathogenic | 0.6418 | pathogenic | -2.0 | Highly Destabilizing | 0.561 | D | 0.671 | neutral | None | None | None | None | N |
M/P | 0.9911 | likely_pathogenic | 0.991 | pathogenic | -1.755 | Destabilizing | 0.722 | D | 0.658 | neutral | None | None | None | None | N |
M/Q | 0.3052 | likely_benign | 0.2848 | benign | -1.808 | Destabilizing | 0.561 | D | 0.587 | neutral | None | None | None | None | N |
M/R | 0.2109 | likely_benign | 0.216 | benign | -1.638 | Destabilizing | 0.326 | N | 0.672 | neutral | N | 0.383855304 | None | None | N |
M/S | 0.3972 | ambiguous | 0.3518 | ambiguous | -2.58 | Highly Destabilizing | 0.209 | N | 0.6 | neutral | None | None | None | None | N |
M/T | 0.2032 | likely_benign | 0.1705 | benign | -2.292 | Highly Destabilizing | 0.002 | N | 0.383 | neutral | N | 0.462124087 | None | None | N |
M/V | 0.1594 | likely_benign | 0.1232 | benign | -1.755 | Destabilizing | 0.001 | N | 0.21 | neutral | N | 0.448290785 | None | None | N |
M/W | 0.7953 | likely_pathogenic | 0.8067 | pathogenic | -1.293 | Destabilizing | 0.991 | D | 0.701 | prob.neutral | None | None | None | None | N |
M/Y | 0.7376 | likely_pathogenic | 0.7383 | pathogenic | -1.342 | Destabilizing | 0.965 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.