Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27458 | 82597;82598;82599 | chr2:178563760;178563759;178563758 | chr2:179428487;179428486;179428485 |
N2AB | 25817 | 77674;77675;77676 | chr2:178563760;178563759;178563758 | chr2:179428487;179428486;179428485 |
N2A | 24890 | 74893;74894;74895 | chr2:178563760;178563759;178563758 | chr2:179428487;179428486;179428485 |
N2B | 18393 | 55402;55403;55404 | chr2:178563760;178563759;178563758 | chr2:179428487;179428486;179428485 |
Novex-1 | 18518 | 55777;55778;55779 | chr2:178563760;178563759;178563758 | chr2:179428487;179428486;179428485 |
Novex-2 | 18585 | 55978;55979;55980 | chr2:178563760;178563759;178563758 | chr2:179428487;179428486;179428485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1335006996 | -0.538 | 0.999 | D | 0.866 | 0.43 | 0.572964795716 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
S/F | rs1335006996 | -0.538 | 0.999 | D | 0.866 | 0.43 | 0.572964795716 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2728 | likely_benign | 0.2476 | benign | -0.495 | Destabilizing | 0.994 | D | 0.539 | neutral | N | 0.489883751 | None | None | N |
S/C | 0.3495 | ambiguous | 0.3181 | benign | -0.257 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.508054139 | None | None | N |
S/D | 0.945 | likely_pathogenic | 0.9357 | pathogenic | -0.128 | Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | N |
S/E | 0.976 | likely_pathogenic | 0.9743 | pathogenic | -0.017 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
S/F | 0.9415 | likely_pathogenic | 0.9265 | pathogenic | -0.42 | Destabilizing | 0.999 | D | 0.866 | deleterious | D | 0.538969504 | None | None | N |
S/G | 0.3291 | likely_benign | 0.2744 | benign | -0.843 | Destabilizing | 0.998 | D | 0.661 | prob.neutral | None | None | None | None | N |
S/H | 0.9648 | likely_pathogenic | 0.957 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
S/I | 0.8435 | likely_pathogenic | 0.8196 | pathogenic | 0.351 | Stabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
S/K | 0.9955 | likely_pathogenic | 0.9948 | pathogenic | -0.163 | Destabilizing | 0.998 | D | 0.778 | deleterious | None | None | None | None | N |
S/L | 0.6271 | likely_pathogenic | 0.5805 | pathogenic | 0.351 | Stabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
S/M | 0.6988 | likely_pathogenic | 0.661 | pathogenic | 0.223 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
S/N | 0.8451 | likely_pathogenic | 0.8202 | pathogenic | -0.468 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
S/P | 0.9789 | likely_pathogenic | 0.9775 | pathogenic | 0.106 | Stabilizing | 0.999 | D | 0.901 | deleterious | N | 0.480360643 | None | None | N |
S/Q | 0.9767 | likely_pathogenic | 0.9742 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
S/R | 0.9937 | likely_pathogenic | 0.9927 | pathogenic | -0.404 | Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | N |
S/T | 0.14 | likely_benign | 0.1311 | benign | -0.339 | Destabilizing | 0.997 | D | 0.697 | prob.delet. | N | 0.46742463 | None | None | N |
S/V | 0.7603 | likely_pathogenic | 0.7343 | pathogenic | 0.106 | Stabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
S/W | 0.9601 | likely_pathogenic | 0.9512 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
S/Y | 0.9221 | likely_pathogenic | 0.8995 | pathogenic | -0.152 | Destabilizing | 0.999 | D | 0.875 | deleterious | D | 0.539222993 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.