Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27479 | 82660;82661;82662 | chr2:178563697;178563696;178563695 | chr2:179428424;179428423;179428422 |
N2AB | 25838 | 77737;77738;77739 | chr2:178563697;178563696;178563695 | chr2:179428424;179428423;179428422 |
N2A | 24911 | 74956;74957;74958 | chr2:178563697;178563696;178563695 | chr2:179428424;179428423;179428422 |
N2B | 18414 | 55465;55466;55467 | chr2:178563697;178563696;178563695 | chr2:179428424;179428423;179428422 |
Novex-1 | 18539 | 55840;55841;55842 | chr2:178563697;178563696;178563695 | chr2:179428424;179428423;179428422 |
Novex-2 | 18606 | 56041;56042;56043 | chr2:178563697;178563696;178563695 | chr2:179428424;179428423;179428422 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1704559289 | None | 0.007 | N | 0.245 | 0.243 | 0.275215494804 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77362E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1017 | likely_benign | 0.0998 | benign | -0.49 | Destabilizing | 0.309 | N | 0.397 | neutral | N | 0.473854454 | None | None | I |
S/C | 0.1442 | likely_benign | 0.1374 | benign | -0.363 | Destabilizing | 0.996 | D | 0.453 | neutral | None | None | None | None | I |
S/D | 0.6076 | likely_pathogenic | 0.6585 | pathogenic | 0.251 | Stabilizing | 0.742 | D | 0.401 | neutral | None | None | None | None | I |
S/E | 0.7073 | likely_pathogenic | 0.7443 | pathogenic | 0.219 | Stabilizing | 0.742 | D | 0.403 | neutral | None | None | None | None | I |
S/F | 0.2687 | likely_benign | 0.2712 | benign | -0.848 | Destabilizing | 0.953 | D | 0.517 | neutral | None | None | None | None | I |
S/G | 0.1238 | likely_benign | 0.1206 | benign | -0.691 | Destabilizing | 0.009 | N | 0.135 | neutral | None | None | None | None | I |
S/H | 0.5282 | ambiguous | 0.5423 | ambiguous | -1.125 | Destabilizing | 0.996 | D | 0.432 | neutral | None | None | None | None | I |
S/I | 0.2414 | likely_benign | 0.2364 | benign | -0.077 | Destabilizing | 0.91 | D | 0.537 | neutral | None | None | None | None | I |
S/K | 0.8425 | likely_pathogenic | 0.8554 | pathogenic | -0.509 | Destabilizing | 0.742 | D | 0.402 | neutral | None | None | None | None | I |
S/L | 0.1142 | likely_benign | 0.1108 | benign | -0.077 | Destabilizing | 0.521 | D | 0.5 | neutral | N | 0.507381948 | None | None | I |
S/M | 0.2069 | likely_benign | 0.1989 | benign | 0.004 | Stabilizing | 0.996 | D | 0.432 | neutral | None | None | None | None | I |
S/N | 0.2141 | likely_benign | 0.2152 | benign | -0.393 | Destabilizing | 0.742 | D | 0.446 | neutral | None | None | None | None | I |
S/P | 0.7895 | likely_pathogenic | 0.827 | pathogenic | -0.182 | Destabilizing | 0.007 | N | 0.245 | neutral | N | 0.49256782 | None | None | I |
S/Q | 0.6741 | likely_pathogenic | 0.6826 | pathogenic | -0.508 | Destabilizing | 0.953 | D | 0.451 | neutral | None | None | None | None | I |
S/R | 0.7962 | likely_pathogenic | 0.8162 | pathogenic | -0.4 | Destabilizing | 0.91 | D | 0.473 | neutral | None | None | None | None | I |
S/T | 0.0682 | likely_benign | 0.0675 | benign | -0.44 | Destabilizing | 0.003 | N | 0.106 | neutral | N | 0.431323964 | None | None | I |
S/V | 0.2131 | likely_benign | 0.2094 | benign | -0.182 | Destabilizing | 0.59 | D | 0.489 | neutral | None | None | None | None | I |
S/W | 0.4749 | ambiguous | 0.494 | ambiguous | -0.87 | Destabilizing | 0.996 | D | 0.633 | neutral | None | None | None | None | I |
S/Y | 0.292 | likely_benign | 0.2993 | benign | -0.577 | Destabilizing | 0.984 | D | 0.515 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.