Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27480 | 82663;82664;82665 | chr2:178563694;178563693;178563692 | chr2:179428421;179428420;179428419 |
N2AB | 25839 | 77740;77741;77742 | chr2:178563694;178563693;178563692 | chr2:179428421;179428420;179428419 |
N2A | 24912 | 74959;74960;74961 | chr2:178563694;178563693;178563692 | chr2:179428421;179428420;179428419 |
N2B | 18415 | 55468;55469;55470 | chr2:178563694;178563693;178563692 | chr2:179428421;179428420;179428419 |
Novex-1 | 18540 | 55843;55844;55845 | chr2:178563694;178563693;178563692 | chr2:179428421;179428420;179428419 |
Novex-2 | 18607 | 56044;56045;56046 | chr2:178563694;178563693;178563692 | chr2:179428421;179428420;179428419 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | rs1457913909 | None | 0.939 | N | 0.407 | 0.231 | 0.250579442822 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4182 | ambiguous | 0.3909 | ambiguous | -0.767 | Destabilizing | 0.996 | D | 0.396 | neutral | None | None | None | None | N |
A/D | 0.4697 | ambiguous | 0.4036 | ambiguous | -0.291 | Destabilizing | 0.02 | N | 0.295 | neutral | None | None | None | None | N |
A/E | 0.4495 | ambiguous | 0.4001 | ambiguous | -0.435 | Destabilizing | 0.521 | D | 0.397 | neutral | N | 0.421336257 | None | None | N |
A/F | 0.3893 | ambiguous | 0.3447 | ambiguous | -0.845 | Destabilizing | 0.91 | D | 0.489 | neutral | None | None | None | None | N |
A/G | 0.1577 | likely_benign | 0.139 | benign | -0.375 | Destabilizing | 0.521 | D | 0.396 | neutral | N | 0.492929783 | None | None | N |
A/H | 0.5755 | likely_pathogenic | 0.5133 | ambiguous | -0.415 | Destabilizing | 0.996 | D | 0.46 | neutral | None | None | None | None | N |
A/I | 0.3277 | likely_benign | 0.2904 | benign | -0.309 | Destabilizing | 0.02 | N | 0.321 | neutral | None | None | None | None | N |
A/K | 0.6836 | likely_pathogenic | 0.6427 | pathogenic | -0.641 | Destabilizing | 0.91 | D | 0.384 | neutral | None | None | None | None | N |
A/L | 0.1889 | likely_benign | 0.1645 | benign | -0.309 | Destabilizing | 0.59 | D | 0.393 | neutral | None | None | None | None | N |
A/M | 0.2202 | likely_benign | 0.1929 | benign | -0.363 | Destabilizing | 0.974 | D | 0.391 | neutral | None | None | None | None | N |
A/N | 0.2277 | likely_benign | 0.1882 | benign | -0.32 | Destabilizing | 0.835 | D | 0.455 | neutral | None | None | None | None | N |
A/P | 0.7551 | likely_pathogenic | 0.7301 | pathogenic | -0.272 | Destabilizing | 0.939 | D | 0.407 | neutral | N | 0.513651772 | None | None | N |
A/Q | 0.4245 | ambiguous | 0.3888 | ambiguous | -0.574 | Destabilizing | 0.91 | D | 0.421 | neutral | None | None | None | None | N |
A/R | 0.6082 | likely_pathogenic | 0.5793 | pathogenic | -0.213 | Destabilizing | 0.91 | D | 0.413 | neutral | None | None | None | None | N |
A/S | 0.0931 | likely_benign | 0.0847 | benign | -0.567 | Destabilizing | 0.028 | N | 0.186 | neutral | N | 0.432169326 | None | None | N |
A/T | 0.0882 | likely_benign | 0.0779 | benign | -0.624 | Destabilizing | 0.007 | N | 0.089 | neutral | N | 0.465436538 | None | None | N |
A/V | 0.1498 | likely_benign | 0.1361 | benign | -0.272 | Destabilizing | 0.521 | D | 0.399 | neutral | N | 0.517596154 | None | None | N |
A/W | 0.8307 | likely_pathogenic | 0.795 | pathogenic | -0.998 | Destabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | N |
A/Y | 0.5511 | ambiguous | 0.5014 | ambiguous | -0.644 | Destabilizing | 0.984 | D | 0.485 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.